Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.83□□□□□ -1.48
RaraP11416 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RaraP11416 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RaraP11416 Gm23424-201ENSMUST00000103889 110 ntBASIC5.83□□□□□ -1.48
RaraP11416 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RaraP11416 Gm12244-201ENSMUST00000119500 291 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm4660-201ENSMUST00000131499 403 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm22791-201ENSMUST00000157232 145 ntBASIC5.83□□□□□ -1.48
RaraP11416 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.83□□□□□ -1.48
RaraP11416 Mir6382-201ENSMUST00000184055 110 ntBASIC5.83□□□□□ -1.48
RaraP11416 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm27694-201ENSMUST00000184740 86 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm29228-201ENSMUST00000185489 418 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm37609-201ENSMUST00000191778 678 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm37966-201ENSMUST00000193122 326 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm44571-201ENSMUST00000208092 533 ntBASIC5.83□□□□□ -1.48
RaraP11416 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.83□□□□□ -1.48
RaraP11416 Gm7128-201ENSMUST00000211639 533 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm21112-201ENSMUST00000212224 578 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm7760-201ENSMUST00000212265 578 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm7807-201ENSMUST00000212475 578 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.83□□□□□ -1.48
RaraP11416 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.83□□□□□ -1.48
RaraP11416 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.83□□□□□ -1.48
RaraP11416 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.83□□□□□ -1.48
RaraP11416 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.83□□□□□ -1.48
RaraP11416 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.83□□□□□ -1.48
RaraP11416 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RaraP11416 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RaraP11416 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
RaraP11416 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.83□□□□□ -1.48
RaraP11416 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RaraP11416 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.83□□□□□ -1.48
RaraP11416 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.83□□□□□ -1.48
RaraP11416 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
RaraP11416 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RaraP11416 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.83□□□□□ -1.48
RaraP11416 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.82□□□□□ -1.48
RaraP11416 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RaraP11416 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RaraP11416 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
RaraP11416 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RaraP11416 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RaraP11416 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RaraP11416 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RaraP11416 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RaraP11416 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RaraP11416 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RaraP11416 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
RaraP11416 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RaraP11416 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.82□□□□□ -1.48
RaraP11416 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.82□□□□□ -1.48
RaraP11416 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.82□□□□□ -1.48
RaraP11416 Gm15531-201ENSMUST00000118062 252 ntBASIC5.82□□□□□ -1.48
RaraP11416 Gm12646-201ENSMUST00000119144 238 ntBASIC5.82□□□□□ -1.48
RaraP11416 Gm13717-201ENSMUST00000119868 365 ntBASIC5.82□□□□□ -1.48
RaraP11416 Gm25861-201ENSMUST00000158251 109 ntBASIC5.82□□□□□ -1.48
RaraP11416 Mir5128-201ENSMUST00000175217 84 ntBASIC5.82□□□□□ -1.48
RaraP11416 Gm22420-201ENSMUST00000178795 126 ntBASIC5.82□□□□□ -1.48
RaraP11416 Gm28506-201ENSMUST00000189937 150 ntBASIC5.82□□□□□ -1.48
RaraP11416 Gm36382-201ENSMUST00000198892 541 ntBASIC5.82□□□□□ -1.48
RaraP11416 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.82□□□□□ -1.48
RaraP11416 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.82□□□□□ -1.48
RaraP11416 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.82□□□□□ -1.48
RaraP11416 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.82□□□□□ -1.48
RaraP11416 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.82□□□□□ -1.48
RaraP11416 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.82□□□□□ -1.48
RaraP11416 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.82□□□□□ -1.48
RaraP11416 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.82□□□□□ -1.48
RaraP11416 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.82□□□□□ -1.48
RaraP11416 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.82□□□□□ -1.48
RaraP11416 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RaraP11416 Gm26439-201ENSMUST00000082592 106 ntBASIC5.82□□□□□ -1.48
RaraP11416 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.82□□□□□ -1.48
RaraP11416 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.82□□□□□ -1.48
RaraP11416 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RaraP11416 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
RaraP11416 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RaraP11416 Smc5-206ENSMUST00000226111 3265 ntBASIC5.82□□□□□ -1.48
RaraP11416 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
RaraP11416 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RaraP11416 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.81□□□□□ -1.48
RaraP11416 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RaraP11416 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.81□□□□□ -1.48
RaraP11416 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RaraP11416 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RaraP11416 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.81□□□□□ -1.48
RaraP11416 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RaraP11416 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms