Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lire1P11260 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lire1P11260 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Lire1P11260 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
Lire1P11260 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Lire1P11260 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.28□□□□□ -1.73
Lire1P11260 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Lire1P11260 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lire1P11260 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Lire1P11260 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lire1P11260 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
Lire1P11260 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lire1P11260 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lire1P11260 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lire1P11260 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.27□□□□□ -1.73
Lire1P11260 Gm15916-201ENSMUST00000118355 736 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Gm12186-201ENSMUST00000119050 945 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Gm13865-201ENSMUST00000120957 865 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Gm13220-201ENSMUST00000121535 508 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Gm13745-201ENSMUST00000121994 527 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.27□□□□□ -1.73
Lire1P11260 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lire1P11260 Gm19898-201ENSMUST00000177490 251 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Gm21850-201ENSMUST00000179792 359 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Gm28615-201ENSMUST00000187527 482 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.27□□□□□ -1.73
Lire1P11260 Gm17951-201ENSMUST00000198536 496 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.27□□□□□ -1.73
Lire1P11260 Gm44402-201ENSMUST00000203677 238 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Lire1P11260 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Lire1P11260 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Lire1P11260 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.27□□□□□ -1.73
Lire1P11260 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Lire1P11260 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Lire1P11260 Gm42701-201ENSMUST00000196117 1657 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lire1P11260 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Lire1P11260 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lire1P11260 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Lire1P11260 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Lire1P11260 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.26□□□□□ -1.73
Lire1P11260 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Lire1P11260 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lire1P11260 Gm23501-201ENSMUST00000157744 256 ntBASIC4.26□□□□□ -1.73
Lire1P11260 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Lire1P11260 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Lire1P11260 Gm5258-201ENSMUST00000165437 327 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Mir7022-201ENSMUST00000183749 61 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Gm6546-201ENSMUST00000192096 766 ntBASIC4.26□□□□□ -1.73
Lire1P11260 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Gm18340-201ENSMUST00000196342 609 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Gm44300-201ENSMUST00000196792 121 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC4.26□□□□□ -1.73
Lire1P11260 Gm17937-201ENSMUST00000197908 742 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Gm43198-201ENSMUST00000200927 326 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Gm19244-201ENSMUST00000204340 253 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lire1P11260 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.26□□□□□ -1.73
Lire1P11260 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lire1P11260 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lire1P11260 Mir346-201ENSMUST00000083547 98 ntBASIC4.26□□□□□ -1.73
Lire1P11260 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Lire1P11260 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.26□□□□□ -1.73
Lire1P11260 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Lire1P11260 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Lire1P11260 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Lire1P11260 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Lire1P11260 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Lire1P11260 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Lire1P11260 Gm22493-201ENSMUST00000104494 132 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm15752-201ENSMUST00000117427 394 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm8666-201ENSMUST00000117517 292 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm15231-201ENSMUST00000119174 447 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm12190-201ENSMUST00000120001 187 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.25□□□□□ -1.73
Lire1P11260 Gm23587-201ENSMUST00000157658 84 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm16026-202ENSMUST00000159695 772 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm18604-201ENSMUST00000172535 558 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm26460-201ENSMUST00000175061 126 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm25198-201ENSMUST00000178574 110 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.25□□□□□ -1.73
Lire1P11260 Mir6907-201ENSMUST00000183764 71 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm27564-201ENSMUST00000185196 96 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm28097-201ENSMUST00000187333 366 ntBASIC4.25□□□□□ -1.73
Lire1P11260 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm37878-201ENSMUST00000192108 387 ntBASIC4.25□□□□□ -1.73
Lire1P11260 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.25□□□□□ -1.73
Lire1P11260 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms