Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm8402-201ENSMUST00000118183 1770 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm8383-201ENSMUST00000121179 1770 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm12458-201ENSMUST00000119387 495 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm12276-201ENSMUST00000121709 301 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm18403-201ENSMUST00000192907 529 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm2710-201ENSMUST00000073196 603 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm24533-201ENSMUST00000083138 196 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Gm18597-201ENSMUST00000209519 694 ntBASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Scn8aQ9WTU3 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm14811-201ENSMUST00000117070 117 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm11877-201ENSMUST00000118921 852 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm13692-201ENSMUST00000120774 371 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm26254-201ENSMUST00000122491 118 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm22910-201ENSMUST00000178568 132 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 AC154627.2-201ENSMUST00000227028 4669 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm9765-201ENSMUST00000043170 321 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm22115-201ENSMUST00000103976 133 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm23923-201ENSMUST00000104108 133 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm25168-201ENSMUST00000104189 132 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm9157-201ENSMUST00000117673 225 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm29064-201ENSMUST00000187014 813 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Snora31-201ENSMUST00000083213 130 ntBASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Scn8aQ9WTU3 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm14681-201ENSMUST00000118047 411 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm13532-201ENSMUST00000120373 240 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm14810-201ENSMUST00000121628 486 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm23775-201ENSMUST00000158991 249 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm28871-201ENSMUST00000186191 687 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm42758-201ENSMUST00000202146 283 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm7946-201ENSMUST00000203326 958 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 AC159476.1-201ENSMUST00000215914 1668 ntBASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Scn8aQ9WTU3 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.85
Scn8aQ9WTU3 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Scn8aQ9WTU3 Gm14581-201ENSMUST00000121726 198 ntBASIC3.52□□□□□ -1.85
Scn8aQ9WTU3 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Scn8aQ9WTU3 Gm25066-201ENSMUST00000158145 123 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms