Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm5885-202ENSMUST00000203357 528 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 AC159293.2-201ENSMUST00000222289 424 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm23273-201ENSMUST00000104058 135 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm23226-201ENSMUST00000116927 103 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm8666-201ENSMUST00000117517 292 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm12173-201ENSMUST00000117622 273 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm14890-201ENSMUST00000117660 676 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm13478-201ENSMUST00000118312 413 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm13080-201ENSMUST00000120556 420 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm11506-201ENSMUST00000122414 470 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm22135-201ENSMUST00000158752 108 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm19898-201ENSMUST00000177490 251 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm29563-201ENSMUST00000187249 496 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm9541-201ENSMUST00000188409 502 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm29038-201ENSMUST00000191543 678 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm37501-201ENSMUST00000192830 691 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm44354-201ENSMUST00000196017 143 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm44349-201ENSMUST00000197048 123 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm43855-201ENSMUST00000197462 507 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm6590-201ENSMUST00000203343 687 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm17987-201ENSMUST00000206902 603 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm21089-201ENSMUST00000215843 325 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm5649-201ENSMUST00000217918 951 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm29884-201ENSMUST00000218403 453 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim3Q9R1R2 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Mir92b-201ENSMUST00000102300 83 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm24067-201ENSMUST00000104514 85 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm14753-201ENSMUST00000118503 246 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm25177-201ENSMUST00000122634 117 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm23554-201ENSMUST00000157818 110 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm22314-201ENSMUST00000158007 281 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm23215-201ENSMUST00000178153 121 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm27025-201ENSMUST00000182392 942 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm27695-201ENSMUST00000184301 91 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm43494-201ENSMUST00000197672 388 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm3010-201ENSMUST00000198805 448 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 Gm45189-201ENSMUST00000208567 363 ntBASIC3.8□□□□□ -1.8
Trim3Q9R1R2 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms