Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm23697-201ENSMUST00000103897 110 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Mir1188-201ENSMUST00000116756 120 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm12691-201ENSMUST00000120186 456 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm13080-201ENSMUST00000120556 420 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm16458-201ENSMUST00000121428 502 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm15157-201ENSMUST00000121852 702 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm11344-201ENSMUST00000122011 335 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm23225-201ENSMUST00000158121 114 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm23205-201ENSMUST00000158671 103 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm16569-201ENSMUST00000160526 314 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm17204-201ENSMUST00000167936 478 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm20401-201ENSMUST00000173717 212 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm28552-201ENSMUST00000190725 388 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm29138-201ENSMUST00000191444 348 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm38270-201ENSMUST00000192721 407 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm42566-201ENSMUST00000197120 643 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm42516-201ENSMUST00000198691 767 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm7838-201ENSMUST00000203221 1189 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm6988-201ENSMUST00000222676 375 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Snord15b-201ENSMUST00000083032 145 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm24611-201ENSMUST00000083272 107 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm23846-201ENSMUST00000083835 107 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trem1Q9JKE2 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm15297-201ENSMUST00000117795 290 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm12901-201ENSMUST00000118690 532 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm12186-201ENSMUST00000119050 945 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Mup-ps16-201ENSMUST00000120085 596 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm11797-201ENSMUST00000121336 754 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm7840-201ENSMUST00000122086 533 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm16345-201ENSMUST00000146065 158 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm23537-201ENSMUST00000157536 330 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm22501-201ENSMUST00000158981 127 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm23638-201ENSMUST00000175073 126 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm23158-201ENSMUST00000175076 126 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm22907-201ENSMUST00000175198 126 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm22625-201ENSMUST00000175382 126 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm22875-201ENSMUST00000175449 126 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm25197-201ENSMUST00000175516 126 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm27857-201ENSMUST00000176930 126 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm26268-201ENSMUST00000177685 126 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm23681-201ENSMUST00000178821 126 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm7909-201ENSMUST00000182688 614 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm27940-201ENSMUST00000184449 98 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm19620-201ENSMUST00000195972 434 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm19131-201ENSMUST00000203408 789 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm45007-201ENSMUST00000206237 366 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Olfr844-201ENSMUST00000054106 930 ntBASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trem1Q9JKE2 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms