Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Mir6345-201ENSMUST00000184286 128 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm43601-201ENSMUST00000196294 945 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm43476-201ENSMUST00000197873 405 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm44403-201ENSMUST00000198554 129 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm42625-201ENSMUST00000198611 922 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm44852-201ENSMUST00000207950 369 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm8106-201ENSMUST00000213123 523 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm4052-201ENSMUST00000220890 451 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm46369-201ENSMUST00000221577 401 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm5548-201ENSMUST00000055878 397 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Mir1251-201ENSMUST00000175486 84 ntBASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Gm17951-201ENSMUST00000198536 496 ntBASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Gm45162-201ENSMUST00000209013 618 ntBASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.64□□□□□ -1.83
Lima1Q9ERG0 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.64□□□□□ -1.83
Lima1Q9ERG0 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Gm7099-201ENSMUST00000080066 554 ntBASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Lima1Q9ERG0 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm22269-201ENSMUST00000104002 130 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm26148-201ENSMUST00000157430 68 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm23633-201ENSMUST00000175293 119 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm24811-201ENSMUST00000175313 100 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm25999-201ENSMUST00000175398 133 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm38234-201ENSMUST00000195204 421 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm44099-201ENSMUST00000203299 112 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm18540-201ENSMUST00000204025 526 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm7407-201ENSMUST00000208301 568 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm45690-201ENSMUST00000210775 246 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm3213-201ENSMUST00000219296 441 ntBASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Lima1Q9ERG0 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm23273-201ENSMUST00000104058 135 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm24125-201ENSMUST00000104105 137 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm14299-201ENSMUST00000117586 397 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm12294-201ENSMUST00000119723 490 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm24059-201ENSMUST00000157493 312 ntBASIC3.62□□□□□ -1.83
Lima1Q9ERG0 Gm10067-201ENSMUST00000179462 348 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms