Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Hmgn3Q9DCB1 Olfr713-201ENSMUST00000098139 975 ntBASIC3.21□□□□□ -1.9
Hmgn3Q9DCB1 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Hmgn3Q9DCB1 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Hmgn3Q9DCB1 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Hmgn3Q9DCB1 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm26145-201ENSMUST00000104476 127 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm24855-201ENSMUST00000104848 97 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm12568-201ENSMUST00000117362 624 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm13379-201ENSMUST00000118053 621 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm12543-201ENSMUST00000120410 543 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm22613-201ENSMUST00000122679 292 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm12226-201ENSMUST00000144172 876 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm10075-201ENSMUST00000162030 545 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm20399-201ENSMUST00000174652 132 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm28002-201ENSMUST00000184832 100 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm28471-201ENSMUST00000185994 615 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm21742-201ENSMUST00000189352 548 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm37164-201ENSMUST00000192809 637 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm44852-201ENSMUST00000207950 369 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm17917-201ENSMUST00000218561 953 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Gm18422-202ENSMUST00000203798 2214 ntBASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgn3Q9DCB1 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Snord66-201ENSMUST00000104051 75 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm14788-201ENSMUST00000119457 375 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm13692-201ENSMUST00000120774 371 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm13743-201ENSMUST00000121486 724 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm22120-201ENSMUST00000175590 70 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm29320-201ENSMUST00000185235 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm28146-201ENSMUST00000185517 701 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm8296-201ENSMUST00000185597 524 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm29179-202ENSMUST00000186138 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm28598-201ENSMUST00000186490 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm29448-201ENSMUST00000186675 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm29314-201ENSMUST00000186800 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm28253-202ENSMUST00000187971 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm29268-201ENSMUST00000188669 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm29169-201ENSMUST00000189835 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm29218-205ENSMUST00000190846 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm28978-201ENSMUST00000191120 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm37172-201ENSMUST00000191926 615 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm37828-201ENSMUST00000192496 432 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm37001-201ENSMUST00000193377 190 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm5552-201ENSMUST00000197149 515 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm43559-201ENSMUST00000198755 466 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Hmgn3Q9DCB1 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm23948-201ENSMUST00000104030 132 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm23228-201ENSMUST00000157296 270 ntBASIC3.18□□□□□ -1.9
Hmgn3Q9DCB1 Gm22726-201ENSMUST00000158089 179 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms