Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm27033-201ENSMUST00000183226 544 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm28655-201ENSMUST00000191538 692 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm4248-201ENSMUST00000196905 316 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm29884-201ENSMUST00000218403 453 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm18387-201ENSMUST00000220333 702 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Mir323-201ENSMUST00000083683 86 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm4736-201ENSMUST00000100870 380 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm24544-201ENSMUST00000103862 110 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm15151-201ENSMUST00000117106 177 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm15994-201ENSMUST00000118029 402 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm11890-201ENSMUST00000119585 417 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm1866-201ENSMUST00000120701 477 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm5123-201ENSMUST00000121905 837 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm5755-201ENSMUST00000152394 837 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm26276-201ENSMUST00000157099 109 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm10357-201ENSMUST00000159886 264 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm10067-201ENSMUST00000179462 348 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm23816-201ENSMUST00000179617 132 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Mir6938-201ENSMUST00000184173 63 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm43494-201ENSMUST00000197672 388 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm42453-201ENSMUST00000200477 409 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm19726-201ENSMUST00000205008 240 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Cdc40Q9DC48 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm14163-201ENSMUST00000117342 217 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm15180-201ENSMUST00000117745 492 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm8757-201ENSMUST00000119660 372 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Mir713-201ENSMUST00000178651 108 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm29408-201ENSMUST00000187536 216 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm7182-201ENSMUST00000193351 732 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm21006-201ENSMUST00000196930 667 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Cdc40Q9DC48 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms