Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm6893-201ENSMUST00000118385 522 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm15613-201ENSMUST00000118396 326 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm14383-201ENSMUST00000121637 386 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm14649-201ENSMUST00000121814 324 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm16327-201ENSMUST00000137146 228 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm23231-201ENSMUST00000157299 104 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm16303-201ENSMUST00000161498 390 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm18522-201ENSMUST00000173947 650 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm6625-201ENSMUST00000177870 272 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28625-201ENSMUST00000188309 205 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28314-201ENSMUST00000191276 345 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Mir7682-201ENSMUST00000198467 58 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 AC159819.1-201ENSMUST00000213911 328 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm19219-201ENSMUST00000215863 724 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm19181-201ENSMUST00000218891 940 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Mir30e-201ENSMUST00000083475 92 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm12577-201ENSMUST00000119701 574 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm13687-201ENSMUST00000119857 282 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm8244-201ENSMUST00000121254 264 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm6058-201ENSMUST00000154261 399 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm24014-201ENSMUST00000157728 157 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm26171-201ENSMUST00000158422 131 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm29452-201ENSMUST00000187996 313 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28860-201ENSMUST00000188103 313 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm21006-201ENSMUST00000196930 667 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 CT030662.3-201ENSMUST00000228751 476 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm37124-201ENSMUST00000192140 1992 ntBASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc3Q9D6Y1 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm6373-201ENSMUST00000121026 360 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm23591-201ENSMUST00000157663 286 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm36964-201ENSMUST00000191876 198 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm37001-201ENSMUST00000193377 190 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm38088-201ENSMUST00000195829 241 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm43922-201ENSMUST00000205071 328 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm19761-201ENSMUST00000205372 391 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm44773-201ENSMUST00000207374 557 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm26449-201ENSMUST00000082452 104 ntBASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc3Q9D6Y1 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms