Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm13249-201ENSMUST00000177803 345 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm22776-201ENSMUST00000178634 94 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm23767-201ENSMUST00000179278 94 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm13144-201ENSMUST00000179385 345 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm27611-201ENSMUST00000184690 108 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm42830-201ENSMUST00000196642 313 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm43710-201ENSMUST00000199583 452 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm44988-201ENSMUST00000203835 1161 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm23099-201ENSMUST00000083454 139 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Mir761-201ENSMUST00000103245 76 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Mir208b-201ENSMUST00000104735 77 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm14898-201ENSMUST00000120202 645 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm13000-201ENSMUST00000120937 496 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm14979-201ENSMUST00000121561 1035 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm10059-201ENSMUST00000131139 171 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm2182-201ENSMUST00000145243 663 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm24939-201ENSMUST00000158325 137 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm9613-201ENSMUST00000171662 196 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm28263-201ENSMUST00000185884 400 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm6802-202ENSMUST00000186566 126 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm5731-201ENSMUST00000190969 481 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm6321-201ENSMUST00000194460 1090 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm7407-201ENSMUST00000208301 568 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm18268-201ENSMUST00000208445 943 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm18645-201ENSMUST00000209593 651 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm45727-201ENSMUST00000212886 572 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm3333-202ENSMUST00000221763 1044 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Snord22-201ENSMUST00000083153 126 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.45□□□□□ -1.7
Vps28Q9D1C8 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Vps28Q9D1C8 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Mir105-201ENSMUST00000104655 80 ntBASIC4.44□□□□□ -1.7
Vps28Q9D1C8 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms