Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm26067-201ENSMUST00000103789 110 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm25919-201ENSMUST00000104271 132 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm15113-201ENSMUST00000119280 836 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm11829-201ENSMUST00000121003 282 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm22514-201ENSMUST00000122547 308 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm26001-201ENSMUST00000157989 103 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm23700-201ENSMUST00000158842 102 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm26318-201ENSMUST00000176507 96 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm24520-201ENSMUST00000179510 110 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm7870-201ENSMUST00000184467 616 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm29641-201ENSMUST00000188955 259 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm43015-201ENSMUST00000199087 565 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm42579-201ENSMUST00000200512 734 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gm24166-201ENSMUST00000082724 135 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.14□□□□□ -1.59
Ddx56Q9D0R4 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm37879-201ENSMUST00000193112 1995 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm22091-201ENSMUST00000116908 127 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm13627-201ENSMUST00000119700 706 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm25290-201ENSMUST00000122796 144 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm23534-201ENSMUST00000157539 97 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm23648-201ENSMUST00000180301 107 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm28847-201ENSMUST00000186778 700 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm21856-201ENSMUST00000187547 696 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm5268-201ENSMUST00000189212 940 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm29365-201ENSMUST00000189461 699 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm19066-201ENSMUST00000193232 1078 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm43712-201ENSMUST00000198020 291 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm17850-201ENSMUST00000210023 1154 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm6906-201ENSMUST00000218014 569 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm23506-201ENSMUST00000083077 107 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ddx56Q9D0R4 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms