Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm11398-201ENSMUST00000120330 320 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm15885-201ENSMUST00000122114 388 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm4487-201ENSMUST00000150617 442 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm25908-201ENSMUST00000157624 98 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Mir5098-201ENSMUST00000175320 82 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm23215-201ENSMUST00000178153 121 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm29563-201ENSMUST00000187249 496 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm19774-201ENSMUST00000190667 114 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm28655-201ENSMUST00000191538 692 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm7182-201ENSMUST00000193351 732 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm37418-201ENSMUST00000195031 274 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm43345-201ENSMUST00000199484 269 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Mir132-201ENSMUST00000083603 66 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm26387-201ENSMUST00000104238 132 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm23319-201ENSMUST00000104467 131 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm13607-201ENSMUST00000117875 539 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm13567-201ENSMUST00000118026 247 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm15364-201ENSMUST00000119618 585 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm14605-201ENSMUST00000120599 268 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm14907-201ENSMUST00000121948 854 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm26171-201ENSMUST00000158422 131 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm25713-201ENSMUST00000158625 109 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Mir5106-201ENSMUST00000174936 73 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm37495-201ENSMUST00000194590 264 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm44349-201ENSMUST00000197048 123 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm44023-201ENSMUST00000203710 469 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm7468-201ENSMUST00000203900 652 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Smc1aQ9CU62 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm23058-201ENSMUST00000093703 107 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.51□□□□□ -1.69
Smc1aQ9CU62 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm15916-201ENSMUST00000118355 736 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm13687-201ENSMUST00000119857 282 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm6486-201ENSMUST00000166202 434 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Mir6345-201ENSMUST00000184286 128 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm29105-201ENSMUST00000187256 450 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm17967-201ENSMUST00000195319 647 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm44765-201ENSMUST00000206927 601 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.5□□□□□ -1.69
Smc1aQ9CU62 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.5□□□□□ -1.69
Smc1aQ9CU62 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms