Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm11566-201ENSMUST00000118550 203 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm13064-201ENSMUST00000119125 557 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm2892-201ENSMUST00000145537 711 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm23591-201ENSMUST00000157663 286 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm38270-201ENSMUST00000192721 407 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm5885-202ENSMUST00000203357 528 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 AC132112.1-201ENSMUST00000226354 505 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm5185-201ENSMUST00000080271 619 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm23518-201ENSMUST00000082835 153 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Use1Q9CQ56 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.67□□□□□ -1.82
Use1Q9CQ56 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Use1Q9CQ56 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Use1Q9CQ56 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.66□□□□□ -1.82
Use1Q9CQ56 Gm11406-201ENSMUST00000117418 484 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC3.66□□□□□ -1.82
Use1Q9CQ56 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Use1Q9CQ56 Mir3062-201ENSMUST00000174986 105 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 Gm27828-201ENSMUST00000184108 119 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Use1Q9CQ56 Gm2950-201ENSMUST00000185530 520 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 Gm29479-201ENSMUST00000190352 455 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 Gm18900-201ENSMUST00000193218 584 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 Gm45034-201ENSMUST00000206831 482 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Use1Q9CQ56 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Use1Q9CQ56 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Use1Q9CQ56 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.66□□□□□ -1.82
Use1Q9CQ56 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Use1Q9CQ56 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Use1Q9CQ56 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Use1Q9CQ56 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
Use1Q9CQ56 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Use1Q9CQ56 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm15074-201ENSMUST00000117603 936 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm12190-201ENSMUST00000120001 187 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm11931-201ENSMUST00000121630 447 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm12358-201ENSMUST00000121842 520 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm16060-201ENSMUST00000153140 478 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm23905-201ENSMUST00000157568 109 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm22529-201ENSMUST00000158817 123 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm29105-201ENSMUST00000187256 450 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm29598-201ENSMUST00000188996 588 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm29525-201ENSMUST00000189844 699 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm18547-201ENSMUST00000192439 811 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm8823-201ENSMUST00000193158 433 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm37088-201ENSMUST00000193887 406 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm33973-201ENSMUST00000195148 534 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gm45228-201ENSMUST00000206585 352 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC3.65□□□□□ -1.83
Use1Q9CQ56 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Use1Q9CQ56 AC154198.1-201ENSMUST00000222839 424 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.65□□□□□ -1.83
Use1Q9CQ56 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms