Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm24235-201ENSMUST00000104319 129 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Snord72-201ENSMUST00000104549 81 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm25563-201ENSMUST00000104603 74 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm12543-201ENSMUST00000120410 543 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm12693-201ENSMUST00000121965 483 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm25489-201ENSMUST00000158727 141 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Mir3095-201ENSMUST00000175552 87 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm25670-201ENSMUST00000178423 107 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm25314-201ENSMUST00000178810 79 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm26239-201ENSMUST00000178842 107 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm24267-201ENSMUST00000179841 107 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm27161-201ENSMUST00000183960 562 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm28995-201ENSMUST00000186625 261 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Mir142-201ENSMUST00000198092 64 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm44091-201ENSMUST00000205212 649 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Gm24292-201ENSMUST00000082888 107 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Trim11Q99PQ2 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Trim11Q99PQ2 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.09□□□□□ -1.44
Trim11Q99PQ2 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Trim11Q99PQ2 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 AC153532.2-201ENSMUST00000219753 3844 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm25879-201ENSMUST00000104330 107 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm13681-201ENSMUST00000117925 210 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm13755-201ENSMUST00000118509 305 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm13475-201ENSMUST00000119290 234 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm11719-201ENSMUST00000119399 351 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm2020-201ENSMUST00000145242 579 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm24186-201ENSMUST00000157983 127 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm25861-201ENSMUST00000158251 109 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm6673-201ENSMUST00000166114 700 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm17421-201ENSMUST00000167845 674 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm22851-201ENSMUST00000178741 94 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm2719-201ENSMUST00000191929 444 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm20162-201ENSMUST00000193629 871 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm44634-201ENSMUST00000206119 152 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm45588-201ENSMUST00000211213 630 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm18507-201ENSMUST00000218855 525 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 AC154521.1-201ENSMUST00000222635 330 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm8288-201ENSMUST00000223406 593 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 AC141884.1-201ENSMUST00000226327 636 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 AC154239.1-201ENSMUST00000228565 406 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm6177-201ENSMUST00000085589 465 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm37456-201ENSMUST00000193176 5837 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Smc5-206ENSMUST00000226111 3265 ntBASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim11Q99PQ2 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm44587-201ENSMUST00000207399 1685 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm43326-201ENSMUST00000198459 1638 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm25152-201ENSMUST00000157117 114 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm23545-201ENSMUST00000158205 104 ntBASIC6.07□□□□□ -1.44
Trim11Q99PQ2 Gm26352-201ENSMUST00000158223 125 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms