Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm36259-201ENSMUST00000197340 392 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm44871-201ENSMUST00000207821 497 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm45367-201ENSMUST00000210171 347 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm23677-201ENSMUST00000083156 104 ntBASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nup88Q8CEC0 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm24715-201ENSMUST00000102377 95 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Mir1193-201ENSMUST00000116761 121 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm12889-201ENSMUST00000118684 241 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm12379-201ENSMUST00000119607 391 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm24965-201ENSMUST00000157922 106 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm24960-201ENSMUST00000157923 90 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm26036-201ENSMUST00000158149 144 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm18604-201ENSMUST00000172535 558 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm23215-201ENSMUST00000178153 121 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm29556-201ENSMUST00000187591 696 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm44332-201ENSMUST00000203712 433 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm44371-201ENSMUST00000204148 467 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm18585-201ENSMUST00000215197 556 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 AC117656.3-205ENSMUST00000224606 1205 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Mir350-201ENSMUST00000083639 99 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm6361-201ENSMUST00000091031 435 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.73□□□□□ -1.65
Nup88Q8CEC0 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Nup88Q8CEC0 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm24792-201ENSMUST00000104286 128 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm14368-201ENSMUST00000145305 415 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm22314-201ENSMUST00000158007 281 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm4207-201ENSMUST00000173144 960 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm21809-201ENSMUST00000178495 468 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm17412-201ENSMUST00000179261 468 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm17887-201ENSMUST00000200194 547 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm42926-201ENSMUST00000200496 697 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Nup88Q8CEC0 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms