Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm11923-201ENSMUST00000118135 508 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm22985-201ENSMUST00000122754 116 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm24550-201ENSMUST00000158648 279 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm17194-201ENSMUST00000164610 348 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Mir6933-201ENSMUST00000184982 81 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm29288-201ENSMUST00000191582 901 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm37751-201ENSMUST00000192440 1198 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm17967-201ENSMUST00000195319 647 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm45796-201ENSMUST00000212483 114 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 AL929285.1-201ENSMUST00000215522 229 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm22043-201ENSMUST00000082993 158 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Atg4aQ8C9S8 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm2003-201ENSMUST00000118537 636 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm15493-201ENSMUST00000119461 528 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm15926-201ENSMUST00000120492 550 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm13788-201ENSMUST00000120767 601 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm11575-201ENSMUST00000122243 228 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm1989-201ENSMUST00000126244 636 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm25898-201ENSMUST00000158303 106 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm45034-201ENSMUST00000206831 482 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm44681-201ENSMUST00000208447 842 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 AC167977.2-201ENSMUST00000225676 682 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.63□□□□□ -1.67
Atg4aQ8C9S8 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm12090-201ENSMUST00000118692 758 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm11600-201ENSMUST00000119592 240 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm14991-201ENSMUST00000119913 598 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm14649-201ENSMUST00000121814 324 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm5924-201ENSMUST00000132554 871 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm23098-201ENSMUST00000157552 299 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm23365-201ENSMUST00000175019 125 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm25960-201ENSMUST00000175110 125 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm44453-201ENSMUST00000175161 126 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm25195-201ENSMUST00000177656 126 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm37213-201ENSMUST00000193077 586 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm38213-201ENSMUST00000193203 173 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC4.62□□□□□ -1.67
Atg4aQ8C9S8 Gm5309-201ENSMUST00000197416 677 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms