Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm21809-201ENSMUST00000178495 468 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm2092-201ENSMUST00000178887 639 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm17412-201ENSMUST00000179261 468 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm2759-201ENSMUST00000179938 639 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Mir6715-201ENSMUST00000184990 57 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm5372-201ENSMUST00000187540 409 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm37878-201ENSMUST00000192108 387 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm37670-201ENSMUST00000193622 229 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm17766-201ENSMUST00000209223 442 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 AC154681.1-201ENSMUST00000225876 1735 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.28□□□□□ -1.72
Ccdc40Q8BI79 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm25097-201ENSMUST00000104042 145 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm14591-201ENSMUST00000120407 518 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm13080-201ENSMUST00000120556 420 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm12313-201ENSMUST00000121347 421 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm11344-201ENSMUST00000122011 335 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm15075-201ENSMUST00000122187 477 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm26312-201ENSMUST00000157769 165 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm3191-201ENSMUST00000167139 346 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm23215-201ENSMUST00000178153 121 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm25598-201ENSMUST00000179031 107 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm27580-201ENSMUST00000183666 149 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm27190-201ENSMUST00000184890 542 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm27538-201ENSMUST00000185065 294 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm29428-201ENSMUST00000190086 409 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm38332-201ENSMUST00000194189 147 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm8132-201ENSMUST00000204938 640 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm7540-201ENSMUST00000219764 926 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm6863-201ENSMUST00000052882 636 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Gm23099-201ENSMUST00000083454 139 ntBASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc40Q8BI79 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm22019-201ENSMUST00000104359 96 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm26143-201ENSMUST00000104480 108 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm11698-201ENSMUST00000117948 455 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm14688-201ENSMUST00000119169 303 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm16100-201ENSMUST00000120489 231 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm5379-201ENSMUST00000120973 826 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm16147-201ENSMUST00000162143 373 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm27414-201ENSMUST00000185033 381 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm19503-201ENSMUST00000187109 241 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm28788-201ENSMUST00000189717 375 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm29558-201ENSMUST00000190134 375 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm29011-201ENSMUST00000191059 712 ntBASIC4.26□□□□□ -1.73
Ccdc40Q8BI79 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms