Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm14541-201ENSMUST00000118985 157 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm25104-201ENSMUST00000122476 163 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm23958-201ENSMUST00000157207 105 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm22600-201ENSMUST00000157598 269 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm24503-201ENSMUST00000158454 135 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm25713-201ENSMUST00000158625 109 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Mir5112-201ENSMUST00000174897 60 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm22398-201ENSMUST00000174941 125 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm25731-201ENSMUST00000175167 125 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm8703-201ENSMUST00000203793 730 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm18944-201ENSMUST00000207672 643 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm5917-201ENSMUST00000217638 721 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Clrn3Q8BHH8 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Clrn3Q8BHH8 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Clrn3Q8BHH8 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.65□□□□□ -1.82
Clrn3Q8BHH8 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Clrn3Q8BHH8 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm23697-201ENSMUST00000103897 110 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm14753-201ENSMUST00000118503 246 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm14926-201ENSMUST00000120650 508 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm13419-201ENSMUST00000121711 271 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Samd15-201ENSMUST00000169669 1194 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm9890-201ENSMUST00000171867 537 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm27828-201ENSMUST00000184108 119 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm29598-201ENSMUST00000188996 588 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm37416-201ENSMUST00000193596 318 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm5309-201ENSMUST00000197416 677 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Clrn3Q8BHH8 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm22493-201ENSMUST00000104494 132 ntBASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm15151-201ENSMUST00000117106 177 ntBASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm11719-201ENSMUST00000119399 351 ntBASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm11506-201ENSMUST00000122414 470 ntBASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm23198-201ENSMUST00000158811 91 ntBASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm2862-201ENSMUST00000161524 328 ntBASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm20542-201ENSMUST00000174582 372 ntBASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm36247-201ENSMUST00000211834 285 ntBASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.64□□□□□ -1.83
Clrn3Q8BHH8 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms