Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm14874-201ENSMUST00000118995 438 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm15480-201ENSMUST00000120442 519 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm15044-201ENSMUST00000120703 598 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm14362-201ENSMUST00000121679 273 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm25784-201ENSMUST00000122524 81 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm15254-201ENSMUST00000149567 273 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm23743-201ENSMUST00000157389 274 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm22383-201ENSMUST00000158188 327 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm24944-201ENSMUST00000158330 128 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm23312-201ENSMUST00000158774 102 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm3170-201ENSMUST00000168753 850 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm3348-201ENSMUST00000177813 850 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm24306-201ENSMUST00000180229 79 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm7654-201ENSMUST00000186738 683 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm28404-201ENSMUST00000190242 453 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm43541-201ENSMUST00000197208 581 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm43054-201ENSMUST00000199495 884 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm44485-201ENSMUST00000199569 137 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm45023-201ENSMUST00000207951 379 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm45498-201ENSMUST00000210346 283 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm29809-201ENSMUST00000218423 493 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 AC115735.3-201ENSMUST00000227757 513 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm26128-201ENSMUST00000083170 110 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm22126-201ENSMUST00000083244 142 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Mir143-201ENSMUST00000083511 63 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.8□□□□□ -1.64
Rnf220Q6PDX6 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm14385-201ENSMUST00000116315 876 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm11512-201ENSMUST00000119669 663 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm13557-201ENSMUST00000120771 382 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm14366-201ENSMUST00000121970 730 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm5699-201ENSMUST00000152491 723 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm25163-201ENSMUST00000158905 104 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm16589-201ENSMUST00000159522 918 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm16102-201ENSMUST00000160955 420 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm24957-201ENSMUST00000179604 132 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm28640-201ENSMUST00000190918 550 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm43026-201ENSMUST00000202972 325 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm18120-201ENSMUST00000220079 511 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 Gm18116-201ENSMUST00000220920 537 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 AC102291.1-201ENSMUST00000227164 529 ntBASIC4.79□□□□□ -1.64
Rnf220Q6PDX6 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms