Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm33973-201ENSMUST00000195148 534 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC4.72□□□□□ -1.65
CtcfQ61164 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm43848-201ENSMUST00000198060 1247 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm4859-201ENSMUST00000199625 787 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm17850-201ENSMUST00000210023 1154 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm45498-201ENSMUST00000210346 283 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.72□□□□□ -1.65
CtcfQ61164 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.72□□□□□ -1.65
CtcfQ61164 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.72□□□□□ -1.65
CtcfQ61164 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm22423-201ENSMUST00000082861 184 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm22043-201ENSMUST00000082993 158 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm26176-201ENSMUST00000083795 105 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Gm22864-201ENSMUST00000083950 130 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CtcfQ61164 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.72□□□□□ -1.65
CtcfQ61164 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CtcfQ61164 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CtcfQ61164 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
CtcfQ61164 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CtcfQ61164 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CtcfQ61164 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CtcfQ61164 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CtcfQ61164 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CtcfQ61164 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CtcfQ61164 Gm14445-201ENSMUST00000117051 1484 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.71□□□□□ -1.66
CtcfQ61164 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CtcfQ61164 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CtcfQ61164 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CtcfQ61164 Gm23594-201ENSMUST00000104307 134 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm14931-201ENSMUST00000111079 253 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm11432-201ENSMUST00000117334 231 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm15148-201ENSMUST00000117602 156 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm11843-201ENSMUST00000118984 425 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CtcfQ61164 Gm4725-201ENSMUST00000151048 587 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm22789-201ENSMUST00000157884 130 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm24534-201ENSMUST00000157949 291 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm24734-201ENSMUST00000158860 262 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CtcfQ61164 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm29320-201ENSMUST00000185235 615 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm29179-202ENSMUST00000186138 615 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm29448-201ENSMUST00000186675 615 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm29314-201ENSMUST00000186800 615 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.71□□□□□ -1.66
CtcfQ61164 Gm28253-202ENSMUST00000187971 615 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm29169-201ENSMUST00000189835 615 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm43649-201ENSMUST00000196596 391 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CtcfQ61164 AC115047.1-201ENSMUST00000213795 322 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CtcfQ61164 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CtcfQ61164 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CtcfQ61164 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CtcfQ61164 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.71□□□□□ -1.66
CtcfQ61164 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CtcfQ61164 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CtcfQ61164 Gm6043-201ENSMUST00000099961 492 ntBASIC4.71□□□□□ -1.66
CtcfQ61164 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CtcfQ61164 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
CtcfQ61164 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CtcfQ61164 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CtcfQ61164 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CtcfQ61164 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CtcfQ61164 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CtcfQ61164 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CtcfQ61164 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.7□□□□□ -1.66
CtcfQ61164 Gm24590-201ENSMUST00000116699 119 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm11878-201ENSMUST00000117908 400 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gm11393-201ENSMUST00000118019 288 ntBASIC4.7□□□□□ -1.66
CtcfQ61164 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms