Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.72□□□□□ -1.65
Vps54Q5SPW0 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps54Q5SPW0 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Vps54Q5SPW0 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Vps54Q5SPW0 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
Vps54Q5SPW0 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.71□□□□□ -1.65
Vps54Q5SPW0 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
Vps54Q5SPW0 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.71□□□□□ -1.65
Vps54Q5SPW0 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.71□□□□□ -1.65
Vps54Q5SPW0 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm26418-201ENSMUST00000104275 137 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm23322-201ENSMUST00000104464 167 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm7421-201ENSMUST00000119298 639 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm14037-201ENSMUST00000120576 313 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm7365-201ENSMUST00000120877 639 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm21809-201ENSMUST00000178495 468 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm17412-201ENSMUST00000179261 468 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm21991-201ENSMUST00000180006 508 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm4854-201ENSMUST00000185902 574 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm29334-201ENSMUST00000190334 357 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm3933-201ENSMUST00000195391 439 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm21006-201ENSMUST00000196930 667 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm44371-201ENSMUST00000204148 467 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm17911-201ENSMUST00000210806 877 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 AC140393.2-201ENSMUST00000226894 943 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Mir30e-201ENSMUST00000083475 92 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.71□□□□□ -1.66
Vps54Q5SPW0 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm11393-201ENSMUST00000118019 288 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm15994-201ENSMUST00000118029 402 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm14771-201ENSMUST00000118249 203 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm5473-201ENSMUST00000179326 642 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm28639-201ENSMUST00000191519 481 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm18984-201ENSMUST00000193998 1124 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm33973-201ENSMUST00000195148 534 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm36247-201ENSMUST00000211834 285 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm3829-201ENSMUST00000222362 619 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 AC156574.2-201ENSMUST00000228023 282 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Mir28a-201ENSMUST00000083560 86 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Vps54Q5SPW0 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Vps54Q5SPW0 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Mir690-201ENSMUST00000102110 109 ntBASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Gm25169-201ENSMUST00000104190 129 ntBASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Gm24608-201ENSMUST00000104381 136 ntBASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Defa-ps1-201ENSMUST00000119062 282 ntBASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Defa-ps6-201ENSMUST00000122172 282 ntBASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Gm26476-201ENSMUST00000122618 313 ntBASIC4.69□□□□□ -1.66
Vps54Q5SPW0 Gm24745-201ENSMUST00000157840 85 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms