Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Gm10292-201ENSMUST00000183142 581 ntBASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Gm36934-201ENSMUST00000192007 306 ntBASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Gm18540-201ENSMUST00000204025 526 ntBASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Gm43922-201ENSMUST00000205071 328 ntBASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trav5d-4Q5R1F6 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm11260-201ENSMUST00000121163 942 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm5924-201ENSMUST00000132554 871 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm23112-201ENSMUST00000158606 125 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm20399-201ENSMUST00000174652 132 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm28803-201ENSMUST00000190385 764 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm9722-201ENSMUST00000194568 802 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm37791-201ENSMUST00000195081 286 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm2314-201ENSMUST00000200391 586 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm5885-202ENSMUST00000203357 528 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm20177-201ENSMUST00000203705 334 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 AC129323.1-201ENSMUST00000216733 470 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm10042-201ENSMUST00000079884 78 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm14172-201ENSMUST00000118255 644 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm15387-201ENSMUST00000120421 648 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm7182-201ENSMUST00000193351 732 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm36985-201ENSMUST00000195595 379 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Gm35857-201ENSMUST00000212739 178 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trav5d-4Q5R1F6 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms