Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Gm14129-201ENSMUST00000122436 291 ntBASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Gm24504-201ENSMUST00000157679 100 ntBASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Gm17148-201ENSMUST00000164702 249 ntBASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Gm42459-201ENSMUST00000199679 742 ntBASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Gm6520-201ENSMUST00000200636 410 ntBASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Gm45616-201ENSMUST00000211711 319 ntBASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC9.9□□□□□ -0.82
Trim41Q5NCC3 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC9.9□□□□□ -0.82
Trim41Q5NCC3 CT025536.1-201ENSMUST00000226744 844 ntBASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Gm23733-201ENSMUST00000083750 106 ntBASIC9.9□□□□□ -0.82
Trim41Q5NCC3 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim41Q5NCC3 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim41Q5NCC3 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trim41Q5NCC3 AC159244.3-201ENSMUST00000222887 3153 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 AC115289.2-201ENSMUST00000223836 2803 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm11409-201ENSMUST00000118621 403 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm12806-201ENSMUST00000119384 268 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm22204-201ENSMUST00000122654 327 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm16358-201ENSMUST00000146046 210 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm6486-201ENSMUST00000166202 434 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Mir5099-201ENSMUST00000175257 74 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm44419-201ENSMUST00000203338 229 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm45434-201ENSMUST00000210550 293 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Gm7990-201ENSMUST00000212126 593 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Snora23-201ENSMUST00000082517 184 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Mir193a-201ENSMUST00000083461 66 ntBASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim41Q5NCC3 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 AC174797.3-203ENSMUST00000225749 2078 ntBASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Gm27165-201ENSMUST00000183951 232 ntBASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 AC135019.1-201ENSMUST00000219949 307 ntBASIC9.88□□□□□ -0.83
Trim41Q5NCC3 CT025157.1-201ENSMUST00000226241 292 ntBASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Gm23626-201ENSMUST00000082458 133 ntBASIC9.88□□□□□ -0.83
Trim41Q5NCC3 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim41Q5NCC3 Gm44567-201ENSMUST00000205645 2631 ntBASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Gm6175-201ENSMUST00000121351 400 ntBASIC9.87□□□□□ -0.83
Trim41Q5NCC3 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Gm29524-201ENSMUST00000190819 699 ntBASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Gm36985-201ENSMUST00000195595 379 ntBASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Gm5027-201ENSMUST00000206700 375 ntBASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trim41Q5NCC3 AC164297.2-201ENSMUST00000224388 1508 ntBASIC9.87□□□□□ -0.83
Trim41Q5NCC3 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm37077-201ENSMUST00000195723 3691 ntBASIC9.86□□□□□ -0.83
Trim41Q5NCC3 Gm20300-201ENSMUST00000214634 3440 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms