Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Gm43651-201ENSMUST00000199796 439 ntBASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 AC161254.1-201ENSMUST00000220310 3842 ntBASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Gm14681-201ENSMUST00000118047 411 ntBASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Gm13443-201ENSMUST00000120770 555 ntBASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Gm44223-201ENSMUST00000204854 114 ntBASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Gm39147-201ENSMUST00000211376 465 ntBASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 AC164597.2-201ENSMUST00000226738 603 ntBASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Gm42552-201ENSMUST00000196754 4497 ntBASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc88bQ4QRL3 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Gm22538-201ENSMUST00000158169 299 ntBASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Gm8874-201ENSMUST00000196826 286 ntBASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 AC153150.1-201ENSMUST00000226065 3782 ntBASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Gm37298-201ENSMUST00000193770 3868 ntBASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc88bQ4QRL3 Gm11896-201ENSMUST00000121105 820 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Gm16021-201ENSMUST00000121176 219 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Gm23775-201ENSMUST00000158991 249 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 AC115750.1-201ENSMUST00000220441 567 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Gm38083-201ENSMUST00000194758 3498 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Mir1195-201ENSMUST00000116818 98 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Gm12578-201ENSMUST00000121244 417 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Gm17989-201ENSMUST00000211543 412 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 AC132384.13-201ENSMUST00000219556 1159 ntBASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm14811-201ENSMUST00000117070 117 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm11830-201ENSMUST00000120175 561 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm12998-201ENSMUST00000122445 789 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm26027-201ENSMUST00000122725 268 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm26100-201ENSMUST00000157245 127 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm23123-201ENSMUST00000157648 144 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm16563-201ENSMUST00000162673 423 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm26991-201ENSMUST00000180950 620 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm21960-201ENSMUST00000181924 452 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm28781-201ENSMUST00000185760 696 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm28339-201ENSMUST00000185845 696 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm29574-201ENSMUST00000186226 696 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm28828-201ENSMUST00000186601 696 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm29307-201ENSMUST00000187367 696 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm28896-201ENSMUST00000188609 696 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm29339-201ENSMUST00000189613 696 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm28159-201ENSMUST00000190296 696 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm29407-201ENSMUST00000191468 696 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm38107-201ENSMUST00000194873 696 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm38088-201ENSMUST00000195829 241 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm43308-201ENSMUST00000197236 373 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 AC125223.1-203ENSMUST00000225304 498 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Gm6361-201ENSMUST00000091031 435 ntBASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ccdc88bQ4QRL3 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Gm4596-201ENSMUST00000117197 442 ntBASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Gm15142-201ENSMUST00000121013 856 ntBASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Gm4207-201ENSMUST00000173144 960 ntBASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ccdc88bQ4QRL3 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms