Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm17911-201ENSMUST00000210806 877 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm5176-202ENSMUST00000220267 583 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 AC139758.1-201ENSMUST00000226573 930 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim40Q3UWA4 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm12982-201ENSMUST00000117408 190 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm2003-201ENSMUST00000118537 636 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm13737-201ENSMUST00000119793 232 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm12486-201ENSMUST00000120887 541 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm15488-201ENSMUST00000121682 670 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm1989-201ENSMUST00000126244 636 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm23546-201ENSMUST00000158211 137 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm24734-201ENSMUST00000158860 262 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm8807-201ENSMUST00000179328 492 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm26950-201ENSMUST00000182734 498 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm28466-201ENSMUST00000190678 659 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm43524-201ENSMUST00000197278 298 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Mir6994-201ENSMUST00000198985 73 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm42474-201ENSMUST00000201073 505 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm29884-201ENSMUST00000218403 453 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm23628-201ENSMUST00000082464 173 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.82□□□□□ -1.8
Trim40Q3UWA4 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm24544-201ENSMUST00000103862 110 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm23014-201ENSMUST00000104144 130 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm15752-201ENSMUST00000117427 394 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm14512-201ENSMUST00000117924 230 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm12656-201ENSMUST00000118149 577 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm15377-201ENSMUST00000119594 246 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm25264-201ENSMUST00000158519 117 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Mir5098-201ENSMUST00000175320 82 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.81□□□□□ -1.8
Trim40Q3UWA4 Mir7235-201ENSMUST00000183796 56 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms