Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Mir879-201ENSMUST00000104703 76 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm15670-201ENSMUST00000117740 447 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm15126-201ENSMUST00000118631 833 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm15480-201ENSMUST00000120442 519 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm15120-201ENSMUST00000120602 301 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm5924-201ENSMUST00000132554 871 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Snora81-201ENSMUST00000157310 178 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Cfap61-214ENSMUST00000167179 183 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm9134-201ENSMUST00000193186 551 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm19089-201ENSMUST00000197207 613 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm5284-201ENSMUST00000199053 903 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm2623-201ENSMUST00000199229 286 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm42459-201ENSMUST00000199679 742 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Snord15b-201ENSMUST00000083032 145 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm22364-201ENSMUST00000083097 98 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Mir421-201ENSMUST00000083575 76 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm23345-201ENSMUST00000083817 150 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm10794-201ENSMUST00000099624 207 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm336-201ENSMUST00000186376 1480 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 AC163660.3-201ENSMUST00000224253 1563 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l9-201ENSMUST00000101891 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm26504-201ENSMUST00000102033 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm24170-201ENSMUST00000104124 133 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm3267-201ENSMUST00000118671 473 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm13603-201ENSMUST00000119404 83 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm13787-201ENSMUST00000120422 168 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm24910-201ENSMUST00000157289 272 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22725-201ENSMUST00000158092 110 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22258-201ENSMUST00000177645 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm26502-201ENSMUST00000177732 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l13-201ENSMUST00000177737 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm25350-201ENSMUST00000177849 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l15-201ENSMUST00000177940 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm23446-201ENSMUST00000177977 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l4-201ENSMUST00000177982 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm26201-201ENSMUST00000178047 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm24711-201ENSMUST00000178062 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm24609-201ENSMUST00000178166 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm23265-201ENSMUST00000178321 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22812-201ENSMUST00000178329 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l3-201ENSMUST00000178370 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm26246-201ENSMUST00000178388 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22131-201ENSMUST00000178415 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm25155-201ENSMUST00000178450 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm24760-201ENSMUST00000178530 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm26032-201ENSMUST00000178535 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22285-201ENSMUST00000178576 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22776-201ENSMUST00000178634 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22417-201ENSMUST00000178656 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l2-201ENSMUST00000178675 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm26270-201ENSMUST00000178690 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l16-201ENSMUST00000178777 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm25074-201ENSMUST00000178782 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm25210-201ENSMUST00000178813 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm25157-201ENSMUST00000178914 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm23313-201ENSMUST00000178931 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Snord116l17-201ENSMUST00000178936 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm23089-201ENSMUST00000178947 94 ntBASIC4.8□□□□□ -1.64
Usp39Q3TIX9 Gm22046-201ENSMUST00000179027 94 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms