Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
PrkdcP97313 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PrkdcP97313 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
PrkdcP97313 Gm650-201ENSMUST00000144428 1551 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 AC135119.1-201ENSMUST00000227935 3717 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PrkdcP97313 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PrkdcP97313 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
PrkdcP97313 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PrkdcP97313 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PrkdcP97313 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
PrkdcP97313 Gm13504-201ENSMUST00000117490 316 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PrkdcP97313 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PrkdcP97313 Gm29038-201ENSMUST00000191543 678 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 Gm37030-201ENSMUST00000194254 295 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 Gm5983-201ENSMUST00000197739 770 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC2.42□□□□□ -2.02
PrkdcP97313 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PrkdcP97313 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PrkdcP97313 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
PrkdcP97313 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PrkdcP97313 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 Gm38286-201ENSMUST00000195128 3105 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 Gm37628-201ENSMUST00000194644 5440 ntBASIC2.42□□□□□ -2.02
PrkdcP97313 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC2.42□□□□□ -2.02
PrkdcP97313 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PrkdcP97313 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
PrkdcP97313 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm17075-201ENSMUST00000171924 670 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.41□□□□□ -2.02
PrkdcP97313 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
PrkdcP97313 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
PrkdcP97313 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm44530-201ENSMUST00000207920 3559 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm24067-201ENSMUST00000104514 85 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Gm5392-201ENSMUST00000122189 789 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm25866-201ENSMUST00000158245 112 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PrkdcP97313 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.41□□□□□ -2.02
PrkdcP97313 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Mir8116-201ENSMUST00000184134 97 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Gm28069-201ENSMUST00000189926 214 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Gm43355-201ENSMUST00000196541 346 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
PrkdcP97313 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm37862-201ENSMUST00000193079 2533 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PrkdcP97313 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PrkdcP97313 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm42888-201ENSMUST00000202425 4361 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm11387-201ENSMUST00000120266 772 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Gm11363-201ENSMUST00000121672 548 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm17954-201ENSMUST00000195893 607 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm7368-201ENSMUST00000213307 367 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PrkdcP97313 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm13310-201ENSMUST00000120962 1381 ntBASIC2.41□□□□□ -2.02
PrkdcP97313 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
PrkdcP97313 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PrkdcP97313 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PrkdcP97313 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
PrkdcP97313 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
PrkdcP97313 Gm23753-201ENSMUST00000157575 149 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC2.4□□□□□ -2.02
PrkdcP97313 Gm45269-201ENSMUST00000210359 282 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 Gm45240-201ENSMUST00000211437 674 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
PrkdcP97313 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
PrkdcP97313 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
PrkdcP97313 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
PrkdcP97313 Mir291a-201ENSMUST00000104815 82 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
PrkdcP97313 Gm6762-201ENSMUST00000121769 289 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
PrkdcP97313 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC2.4□□□□□ -2.02
PrkdcP97313 Gm22551-201ENSMUST00000157795 103 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 Gm24734-201ENSMUST00000158860 262 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 Gm5066-201ENSMUST00000188479 822 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 AC140393.2-201ENSMUST00000226894 943 ntBASIC2.4□□□□□ -2.02
PrkdcP97313 AC158921.1-201ENSMUST00000227861 3468 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
PrkdcP97313 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PrkdcP97313 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
PrkdcP97313 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PrkdcP97313 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PrkdcP97313 Gm13386-201ENSMUST00000117677 124 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 n-R5s201-201ENSMUST00000122622 116 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Gm15733-201ENSMUST00000132957 242 ntBASIC2.4□□□□□ -2.03
PrkdcP97313 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms