Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.08□□□□□ -1.6
Shmt1P50431 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Shmt1P50431 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Shmt1P50431 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Shmt1P50431 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Shmt1P50431 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Shmt1P50431 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC5.07□□□□□ -1.6
Shmt1P50431 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Shmt1P50431 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Shmt1P50431 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Shmt1P50431 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.07□□□□□ -1.6
Shmt1P50431 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Shmt1P50431 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Shmt1P50431 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Shmt1P50431 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Shmt1P50431 Mir879-201ENSMUST00000104703 76 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm12245-201ENSMUST00000117266 357 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm15168-201ENSMUST00000121057 316 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm12466-201ENSMUST00000121199 620 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.07□□□□□ -1.6
Shmt1P50431 Gm25665-201ENSMUST00000157695 110 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm22116-201ENSMUST00000158791 141 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm25944-201ENSMUST00000178758 94 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm27957-201ENSMUST00000184054 127 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Mir6943-201ENSMUST00000185186 66 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm29086-201ENSMUST00000186774 222 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Shmt1P50431 Gm29085-201ENSMUST00000187108 225 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm29216-201ENSMUST00000187117 492 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Shmt1P50431 Gm37353-201ENSMUST00000194497 313 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm42805-201ENSMUST00000196158 276 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.07□□□□□ -1.6
Shmt1P50431 Gm18011-201ENSMUST00000203717 565 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm5001-201ENSMUST00000204361 331 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Shmt1P50431 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.07□□□□□ -1.6
Shmt1P50431 Gm7530-201ENSMUST00000218466 605 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm18113-201ENSMUST00000220630 303 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm46994-201ENSMUST00000221523 219 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.07□□□□□ -1.6
Shmt1P50431 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.07□□□□□ -1.6
Shmt1P50431 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Shmt1P50431 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Shmt1P50431 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Shmt1P50431 Snord59a-201ENSMUST00000082844 74 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Gm25140-201ENSMUST00000083254 140 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Mir338-201ENSMUST00000083666 98 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Shmt1P50431 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.07□□□□□ -1.6
Shmt1P50431 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Shmt1P50431 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.07□□□□□ -1.6
Shmt1P50431 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Shmt1P50431 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Shmt1P50431 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Shmt1P50431 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Shmt1P50431 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm24430-201ENSMUST00000104077 104 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm22657-201ENSMUST00000104197 132 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm14050-201ENSMUST00000117052 346 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm14197-201ENSMUST00000117480 1049 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm16106-201ENSMUST00000119187 294 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm7421-201ENSMUST00000119298 639 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm12607-201ENSMUST00000120724 493 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm7365-201ENSMUST00000120877 639 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.06□□□□□ -1.6
Shmt1P50431 Gm22726-201ENSMUST00000158089 179 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm22076-201ENSMUST00000158601 84 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm16114-201ENSMUST00000161930 300 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm9294-201ENSMUST00000165198 789 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm5929-201ENSMUST00000166883 487 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Gm26092-201ENSMUST00000179798 97 ntBASIC5.06□□□□□ -1.6
Shmt1P50431 Mir669a-1-201ENSMUST00000180238 97 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms