Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC5.03□□□□□ -1.6
GdnfP48540 Gm44419-201ENSMUST00000203338 229 ntBASIC5.03□□□□□ -1.6
GdnfP48540 Gm19761-201ENSMUST00000205372 391 ntBASIC5.03□□□□□ -1.6
GdnfP48540 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.03□□□□□ -1.6
GdnfP48540 Gm44820-201ENSMUST00000207420 396 ntBASIC5.03□□□□□ -1.6
GdnfP48540 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GdnfP48540 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.03□□□□□ -1.6
GdnfP48540 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.03□□□□□ -1.6
GdnfP48540 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.03□□□□□ -1.6
GdnfP48540 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.03□□□□□ -1.6
GdnfP48540 Gm9292-201ENSMUST00000222008 710 ntBASIC5.03□□□□□ -1.6
GdnfP48540 Gm23939-201ENSMUST00000082880 133 ntBASIC5.03□□□□□ -1.6
GdnfP48540 Gm24200-201ENSMUST00000082955 157 ntBASIC5.03□□□□□ -1.6
GdnfP48540 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GdnfP48540 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
GdnfP48540 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GdnfP48540 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.03□□□□□ -1.6
GdnfP48540 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GdnfP48540 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
GdnfP48540 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
GdnfP48540 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GdnfP48540 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
GdnfP48540 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GdnfP48540 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GdnfP48540 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.03□□□□□ -1.6
GdnfP48540 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.03□□□□□ -1.6
GdnfP48540 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
GdnfP48540 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
GdnfP48540 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm24715-201ENSMUST00000102377 95 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm24889-201ENSMUST00000104388 132 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm13114-201ENSMUST00000117605 106 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm13493-201ENSMUST00000120318 493 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm6446-201ENSMUST00000120604 818 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm13998-201ENSMUST00000120952 335 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm15147-201ENSMUST00000122263 483 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.02□□□□□ -1.61
GdnfP48540 Snora47-201ENSMUST00000157483 138 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm9294-201ENSMUST00000165198 789 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm20698-201ENSMUST00000175657 233 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm20657-201ENSMUST00000177079 515 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GdnfP48540 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GdnfP48540 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GdnfP48540 Gm25156-201ENSMUST00000179809 79 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Mir6363-201ENSMUST00000184880 114 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm43968-201ENSMUST00000203388 389 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm44336-201ENSMUST00000203696 468 ntBASIC5.02□□□□□ -1.61
GdnfP48540 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.02□□□□□ -1.61
GdnfP48540 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.02□□□□□ -1.61
GdnfP48540 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.02□□□□□ -1.61
GdnfP48540 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.02□□□□□ -1.61
GdnfP48540 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
GdnfP48540 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.02□□□□□ -1.61
GdnfP48540 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Gm5229-201ENSMUST00000039375 354 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GdnfP48540 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GdnfP48540 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GdnfP48540 Gm26228-201ENSMUST00000082512 107 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm25080-201ENSMUST00000082526 107 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm26439-201ENSMUST00000082592 106 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm23412-201ENSMUST00000083017 107 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm25518-201ENSMUST00000083864 107 ntBASIC5.02□□□□□ -1.61
GdnfP48540 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
GdnfP48540 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.02□□□□□ -1.61
GdnfP48540 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.02□□□□□ -1.61
GdnfP48540 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.02□□□□□ -1.61
GdnfP48540 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.02□□□□□ -1.61
GdnfP48540 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GdnfP48540 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GdnfP48540 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
GdnfP48540 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.01□□□□□ -1.61
GdnfP48540 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
GdnfP48540 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
GdnfP48540 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.01□□□□□ -1.61
GdnfP48540 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
GdnfP48540 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.01□□□□□ -1.61
GdnfP48540 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms