Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC123705.2-201ENSMUST00000221653 2009 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC6.25□□□□□ -1.41
Rfx1P48377 Gm24835-201ENSMUST00000116777 111 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 n-R5s21-201ENSMUST00000122692 117 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC6.25□□□□□ -1.41
Rfx1P48377 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rfx1P48377 Gm24550-201ENSMUST00000158648 279 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Rfx1P48377 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm24810-201ENSMUST00000175317 70 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm20794-201ENSMUST00000177626 628 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm7094-201ENSMUST00000178379 366 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm27653-201ENSMUST00000185037 136 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rfx1P48377 Gm7266-201ENSMUST00000187999 405 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm18403-201ENSMUST00000192907 529 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm37111-201ENSMUST00000193250 634 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm37030-201ENSMUST00000194254 295 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm43804-201ENSMUST00000198280 456 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm43428-201ENSMUST00000200108 3845 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC6.25□□□□□ -1.41
Rfx1P48377 AC158641.1-201ENSMUST00000218933 229 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 CT573085.1-201ENSMUST00000224279 1197 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 AC126690.1-201ENSMUST00000228898 397 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rfx1P48377 Gm22508-201ENSMUST00000082772 110 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Gm23455-201ENSMUST00000083331 100 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Rfx1P48377 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rfx1P48377 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Rfx1P48377 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rfx1P48377 AC126673.3-201ENSMUST00000223414 3829 ntBASIC6.25□□□□□ -1.41
Rfx1P48377 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rfx1P48377 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rfx1P48377 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rfx1P48377 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rfx1P48377 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rfx1P48377 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Rfx1P48377 Gm26996-201ENSMUST00000204418 1359 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm15772-201ENSMUST00000118533 438 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm12267-201ENSMUST00000121609 761 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm14237-201ENSMUST00000122080 430 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 Gm22530-201ENSMUST00000158820 118 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm3216-201ENSMUST00000166927 486 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm17081-201ENSMUST00000167363 478 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm24418-201ENSMUST00000177597 79 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm24639-201ENSMUST00000178518 79 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm23076-201ENSMUST00000179082 79 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm25077-201ENSMUST00000179157 79 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm17916-202ENSMUST00000187634 1187 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Npn2-202ENSMUST00000189275 235 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm8241-201ENSMUST00000189286 816 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm38044-201ENSMUST00000192964 487 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Trbv24-201ENSMUST00000194614 347 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm44820-201ENSMUST00000207420 396 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.24□□□□□ -1.41
Rfx1P48377 AC090496.1-201ENSMUST00000226020 260 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 CT573086.3-201ENSMUST00000228762 594 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC6.24□□□□□ -1.41
Rfx1P48377 Gm23508-201ENSMUST00000083079 72 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Olfr467-201ENSMUST00000084756 927 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rfx1P48377 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rfx1P48377 Gm37226-201ENSMUST00000191644 3255 ntBASIC6.24□□□□□ -1.41
Rfx1P48377 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rfx1P48377 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx1P48377 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Rfx1P48377 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx1P48377 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx1P48377 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx1P48377 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm15981-201ENSMUST00000119196 457 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Gm5060-201ENSMUST00000120072 599 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm14364-201ENSMUST00000129209 267 ntBASIC6.23□□□□□ -1.41
Rfx1P48377 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.23□□□□□ -1.41
Rfx1P48377 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC6.23□□□□□ -1.41
Rfx1P48377 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms