Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HttP42859 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HttP42859 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC3.62□□□□□ -1.83
HttP42859 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
HttP42859 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC3.62□□□□□ -1.83
HttP42859 Gm23753-201ENSMUST00000157575 149 ntBASIC3.62□□□□□ -1.83
HttP42859 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HttP42859 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.62□□□□□ -1.83
HttP42859 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.62□□□□□ -1.83
HttP42859 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.62□□□□□ -1.83
HttP42859 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.62□□□□□ -1.83
HttP42859 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HttP42859 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.62□□□□□ -1.83
HttP42859 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HttP42859 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC3.62□□□□□ -1.83
HttP42859 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HttP42859 Gm24958-201ENSMUST00000158009 97 ntBASIC3.62□□□□□ -1.83
HttP42859 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HttP42859 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HttP42859 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HttP42859 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HttP42859 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC3.62□□□□□ -1.83
HttP42859 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.62□□□□□ -1.83
HttP42859 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC3.62□□□□□ -1.83
HttP42859 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
HttP42859 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.62□□□□□ -1.83
HttP42859 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HttP42859 Gm26297-201ENSMUST00000179464 132 ntBASIC3.61□□□□□ -1.83
HttP42859 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.61□□□□□ -1.83
HttP42859 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.61□□□□□ -1.83
HttP42859 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HttP42859 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HttP42859 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HttP42859 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HttP42859 Gm22939-201ENSMUST00000103958 131 ntBASIC3.61□□□□□ -1.83
HttP42859 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HttP42859 Gm8392-201ENSMUST00000185647 835 ntBASIC3.61□□□□□ -1.83
HttP42859 Gm42850-201ENSMUST00000202094 201 ntBASIC3.61□□□□□ -1.83
HttP42859 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.61□□□□□ -1.83
HttP42859 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HttP42859 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.61□□□□□ -1.83
HttP42859 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
HttP42859 Gm26028-201ENSMUST00000158660 294 ntBASIC3.61□□□□□ -1.83
HttP42859 Gm25037-201ENSMUST00000175418 110 ntBASIC3.61□□□□□ -1.83
HttP42859 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HttP42859 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HttP42859 Gm6303-201ENSMUST00000210123 471 ntBASIC3.61□□□□□ -1.83
HttP42859 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.61□□□□□ -1.83
HttP42859 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HttP42859 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.61□□□□□ -1.83
HttP42859 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
HttP42859 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HttP42859 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HttP42859 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HttP42859 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
HttP42859 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HttP42859 Gm23123-201ENSMUST00000157648 144 ntBASIC3.6□□□□□ -1.83
HttP42859 Gm16134-201ENSMUST00000161714 336 ntBASIC3.6□□□□□ -1.83
HttP42859 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.6□□□□□ -1.83
HttP42859 Gm6140-201ENSMUST00000192494 966 ntBASIC3.6□□□□□ -1.83
HttP42859 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HttP42859 Gm34005-201ENSMUST00000215834 282 ntBASIC3.6□□□□□ -1.83
HttP42859 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.6□□□□□ -1.83
HttP42859 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HttP42859 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HttP42859 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HttP42859 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HttP42859 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.6□□□□□ -1.83
HttP42859 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HttP42859 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HttP42859 Gm13064-201ENSMUST00000119125 557 ntBASIC3.6□□□□□ -1.83
HttP42859 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HttP42859 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.6□□□□□ -1.83
HttP42859 Gm8600-201ENSMUST00000186320 905 ntBASIC3.6□□□□□ -1.83
HttP42859 Gm18692-201ENSMUST00000193047 511 ntBASIC3.6□□□□□ -1.83
HttP42859 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.6□□□□□ -1.83
HttP42859 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HttP42859 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
HttP42859 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC3.6□□□□□ -1.83
HttP42859 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HttP42859 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HttP42859 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HttP42859 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HttP42859 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HttP42859 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.59□□□□□ -1.83
HttP42859 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HttP42859 Gm8423-201ENSMUST00000211387 607 ntBASIC3.59□□□□□ -1.83
HttP42859 Gm22979-201ENSMUST00000082609 159 ntBASIC3.59□□□□□ -1.83
HttP42859 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.59□□□□□ -1.83
HttP42859 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.59□□□□□ -1.83
HttP42859 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HttP42859 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HttP42859 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.59□□□□□ -1.83
HttP42859 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HttP42859 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HttP42859 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HttP42859 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
HttP42859 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HttP42859 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HttP42859 Gm14518-201ENSMUST00000117351 542 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms