Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.8□□□□□ -1.64
Traf1P39428 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.8□□□□□ -1.64
Traf1P39428 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Traf1P39428 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm26019-201ENSMUST00000104407 119 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm13478-201ENSMUST00000118312 413 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm15916-201ENSMUST00000118355 736 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Traf1P39428 Gm14714-201ENSMUST00000119743 439 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm14875-201ENSMUST00000120881 319 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm5379-201ENSMUST00000120973 826 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm14559-201ENSMUST00000121745 496 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm13868-201ENSMUST00000122411 294 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm24745-201ENSMUST00000157840 85 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm22135-201ENSMUST00000158752 108 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm23702-201ENSMUST00000158840 130 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm20526-201ENSMUST00000173416 158 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Traf1P39428 Gm36964-201ENSMUST00000191876 198 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm38053-201ENSMUST00000193938 160 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm43368-201ENSMUST00000200638 409 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm43967-201ENSMUST00000203787 301 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gm4528-201ENSMUST00000207905 551 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Traf1P39428 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.8□□□□□ -1.64
Traf1P39428 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Traf1P39428 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.8□□□□□ -1.64
Traf1P39428 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Traf1P39428 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Traf1P39428 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Traf1P39428 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Traf1P39428 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Traf1P39428 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Traf1P39428 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.8□□□□□ -1.64
Traf1P39428 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Traf1P39428 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Traf1P39428 Gm42736-201ENSMUST00000200723 1353 ntBASIC4.79□□□□□ -1.64
Traf1P39428 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Traf1P39428 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Traf1P39428 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.79□□□□□ -1.64
Traf1P39428 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Traf1P39428 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.79□□□□□ -1.64
Traf1P39428 Gm24608-201ENSMUST00000104381 136 ntBASIC4.79□□□□□ -1.64
Traf1P39428 Gm2288-201ENSMUST00000118560 638 ntBASIC4.79□□□□□ -1.64
Traf1P39428 Gm13131-201ENSMUST00000122228 321 ntBASIC4.79□□□□□ -1.64
Traf1P39428 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.79□□□□□ -1.64
Traf1P39428 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.79□□□□□ -1.64
Traf1P39428 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Traf1P39428 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Traf1P39428 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.79□□□□□ -1.64
Traf1P39428 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Traf1P39428 Mir5710-201ENSMUST00000176884 69 ntBASIC4.79□□□□□ -1.64
Traf1P39428 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.79□□□□□ -1.64
Traf1P39428 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.79□□□□□ -1.64
Traf1P39428 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.79□□□□□ -1.64
Traf1P39428 Gm35702-201ENSMUST00000198653 511 ntBASIC4.79□□□□□ -1.64
Traf1P39428 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Traf1P39428 Gm5176-202ENSMUST00000220267 583 ntBASIC4.79□□□□□ -1.64
Traf1P39428 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Traf1P39428 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Traf1P39428 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Traf1P39428 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Traf1P39428 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Traf1P39428 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Traf1P39428 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Traf1P39428 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Traf1P39428 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Traf1P39428 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Traf1P39428 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Traf1P39428 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Traf1P39428 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Traf1P39428 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.78□□□□□ -1.64
Traf1P39428 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Traf1P39428 Gm11404-201ENSMUST00000120872 494 ntBASIC4.78□□□□□ -1.64
Traf1P39428 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 Gm25606-201ENSMUST00000158363 95 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Gm25713-201ENSMUST00000158625 109 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Traf1P39428 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Traf1P39428 Gm27715-201ENSMUST00000184714 260 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Gm37319-201ENSMUST00000193500 636 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 Gm7897-201ENSMUST00000193981 554 ntBASIC4.78□□□□□ -1.64
Traf1P39428 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Gm42976-201ENSMUST00000200313 222 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.78□□□□□ -1.64
Traf1P39428 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Traf1P39428 Gm8820-201ENSMUST00000204077 571 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Gm6303-201ENSMUST00000210123 471 ntBASIC4.78□□□□□ -1.64
Traf1P39428 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms