Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm15148-201ENSMUST00000117602 156 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm14656-201ENSMUST00000120342 502 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm13973-201ENSMUST00000121371 894 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm26476-201ENSMUST00000122618 313 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm24961-201ENSMUST00000157918 184 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm24965-201ENSMUST00000157922 106 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm37791-201ENSMUST00000195081 286 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm45608-201ENSMUST00000210948 389 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm18387-201ENSMUST00000220333 702 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm25581-201ENSMUST00000083410 164 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.11□□□□□ -1.75
Chmp6P0C0A3 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm26418-201ENSMUST00000104275 137 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm13831-201ENSMUST00000118764 302 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm8244-201ENSMUST00000121254 264 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm13459-201ENSMUST00000121558 646 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm22988-201ENSMUST00000122759 144 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm7846-201ENSMUST00000145844 274 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm26276-201ENSMUST00000157099 109 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm26028-201ENSMUST00000158660 294 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Mir713-201ENSMUST00000178651 108 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm29408-201ENSMUST00000187536 216 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm37495-201ENSMUST00000194590 264 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm43308-201ENSMUST00000197236 373 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm4501-201ENSMUST00000207330 551 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm4558-201ENSMUST00000207886 521 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm44869-201ENSMUST00000208836 357 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm44887-201ENSMUST00000208980 178 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.1□□□□□ -1.75
Chmp6P0C0A3 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Chmp6P0C0A3 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm11372-201ENSMUST00000117348 570 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm15364-201ENSMUST00000119618 585 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm15019-201ENSMUST00000120148 434 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm15530-201ENSMUST00000122206 555 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm6058-201ENSMUST00000154261 399 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm23959-201ENSMUST00000157208 324 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm23591-201ENSMUST00000157663 286 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm26001-201ENSMUST00000157989 103 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm24739-201ENSMUST00000158855 292 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm10357-201ENSMUST00000159886 264 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm23365-201ENSMUST00000175019 125 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm25960-201ENSMUST00000175110 125 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm44453-201ENSMUST00000175161 126 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm25195-201ENSMUST00000177656 126 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm23816-201ENSMUST00000179617 132 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm9775-201ENSMUST00000189402 331 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm37111-201ENSMUST00000193250 634 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Gm36247-201ENSMUST00000211834 285 ntBASIC4.09□□□□□ -1.75
Chmp6P0C0A3 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.09□□□□□ -1.75
Chmp6P0C0A3 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms