Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm23602-201ENSMUST00000157258 132 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm27715-201ENSMUST00000184714 260 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm42593-201ENSMUST00000198469 377 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Gm7041-201ENSMUST00000201227 524 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 AL929265.1-201ENSMUST00000213427 125 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 AC113305.1-201ENSMUST00000214664 724 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col3a1P08121 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col3a1P08121 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm22739-201ENSMUST00000083437 160 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm29730-201ENSMUST00000192986 1396 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col3a1P08121 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col3a1P08121 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col3a1P08121 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.63□□□□□ -1.67
Col3a1P08121 AC154552.6-201ENSMUST00000221365 1342 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm12577-201ENSMUST00000119701 574 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm15030-201ENSMUST00000119804 484 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.62□□□□□ -1.67
Col3a1P08121 Gm24244-201ENSMUST00000157317 130 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm25066-201ENSMUST00000158145 123 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm23773-201ENSMUST00000158985 296 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm6900-201ENSMUST00000178971 342 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.62□□□□□ -1.67
Col3a1P08121 Gm29452-201ENSMUST00000187996 313 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm28860-201ENSMUST00000188103 313 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm8774-201ENSMUST00000203621 692 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col3a1P08121 Gm19219-201ENSMUST00000215863 724 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col3a1P08121 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col3a1P08121 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col3a1P08121 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col3a1P08121 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.62□□□□□ -1.67
Col3a1P08121 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Col3a1P08121 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col3a1P08121 Gm12276-201ENSMUST00000121709 301 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm16411-201ENSMUST00000122164 1100 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm23666-201ENSMUST00000158053 116 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm24550-201ENSMUST00000158648 279 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm27249-201ENSMUST00000185049 328 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm19637-201ENSMUST00000185933 579 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC4.62□□□□□ -1.67
Col3a1P08121 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC4.62□□□□□ -1.67
Col3a1P08121 Mir703-201ENSMUST00000197105 109 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Col3a1P08121 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC4.62□□□□□ -1.67
Col3a1P08121 Gm45157-201ENSMUST00000208729 401 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC4.62□□□□□ -1.67
Col3a1P08121 Gm46136-201ENSMUST00000214730 565 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 AL929285.1-201ENSMUST00000215522 229 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC4.62□□□□□ -1.67
Col3a1P08121 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col3a1P08121 Mir28a-201ENSMUST00000083560 86 ntBASIC4.62□□□□□ -1.67
Col3a1P08121 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col3a1P08121 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col3a1P08121 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col3a1P08121 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col3a1P08121 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col3a1P08121 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Col3a1P08121 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.61□□□□□ -1.67
Col3a1P08121 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col3a1P08121 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col3a1P08121 Gm24608-201ENSMUST00000104381 136 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col3a1P08121 Gm24976-201ENSMUST00000158972 135 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Gm20399-201ENSMUST00000174652 132 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Gm20693-201ENSMUST00000177431 211 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Gm27155-201ENSMUST00000183716 898 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col3a1P08121 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col3a1P08121 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC4.61□□□□□ -1.67
Col3a1P08121 Gm36964-201ENSMUST00000191876 198 ntBASIC4.61□□□□□ -1.67
Col3a1P08121 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms