Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm14688-201ENSMUST00000119169 303 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm11876-201ENSMUST00000120002 269 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm11896-201ENSMUST00000121105 820 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm12466-201ENSMUST00000121199 620 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm12578-201ENSMUST00000121244 417 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm25665-201ENSMUST00000157695 110 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm23257-201ENSMUST00000158322 132 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm27849-201ENSMUST00000183673 125 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm28976-201ENSMUST00000188070 144 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm29479-201ENSMUST00000190352 455 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm8823-201ENSMUST00000193158 433 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm37290-201ENSMUST00000195775 339 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm45523-201ENSMUST00000210712 799 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 AL669916.5-201ENSMUST00000214874 361 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 AC125190.2-201ENSMUST00000221160 497 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.96□□□□□ -1.94
Hmgb3O54879 AC160999.1-201ENSMUST00000225675 810 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 CT030194.2-201ENSMUST00000225752 379 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm23099-201ENSMUST00000083454 139 ntBASIC2.96□□□□□ -1.94
Hmgb3O54879 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Hmgb3O54879 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Hmgb3O54879 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
Hmgb3O54879 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC2.96□□□□□ -1.94
Hmgb3O54879 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Hmgb3O54879 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Hmgb3O54879 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Hmgb3O54879 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC2.96□□□□□ -1.94
Hmgb3O54879 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Hmgb3O54879 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Hmgb3O54879 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm5155-201ENSMUST00000072381 2841 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm22370-201ENSMUST00000102422 83 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm14512-201ENSMUST00000117924 230 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm12118-201ENSMUST00000119766 532 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm12190-201ENSMUST00000120001 187 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm25965-201ENSMUST00000157170 93 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm23716-201ENSMUST00000157348 144 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm25660-201ENSMUST00000158470 104 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm16101-201ENSMUST00000160695 430 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Mir5127-201ENSMUST00000175295 71 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm36985-201ENSMUST00000195595 379 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Hmgb3O54879 Igkv12-47-201ENSMUST00000196961 356 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm2314-201ENSMUST00000200391 586 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm42850-201ENSMUST00000202094 201 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm45162-201ENSMUST00000209013 618 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC2.95□□□□□ -1.94
Hmgb3O54879 AC174082.1-201ENSMUST00000221106 307 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 CT025616.1-201ENSMUST00000221158 412 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 AC187103.4-202ENSMUST00000225091 230 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 AC154467.1-201ENSMUST00000227527 449 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Hmgb3O54879 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm24626-201ENSMUST00000082621 161 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Hmgb3O54879 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.95□□□□□ -1.94
Hmgb3O54879 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Hmgb3O54879 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Hmgb3O54879 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Hmgb3O54879 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm13228-201ENSMUST00000118937 634 ntBASIC2.94□□□□□ -1.94
Hmgb3O54879 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm7485-201ENSMUST00000119502 1109 ntBASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm15157-201ENSMUST00000121852 702 ntBASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC2.94□□□□□ -1.94
Hmgb3O54879 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC2.94□□□□□ -1.94
Hmgb3O54879 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm37878-201ENSMUST00000192108 387 ntBASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm22897-201ENSMUST00000197860 128 ntBASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm4045-201ENSMUST00000204076 310 ntBASIC2.94□□□□□ -1.94
Hmgb3O54879 Gm35857-201ENSMUST00000212739 178 ntBASIC2.94□□□□□ -1.94
Hmgb3O54879 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.94□□□□□ -1.94
Hmgb3O54879 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.94□□□□□ -1.94
Hmgb3O54879 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC2.94□□□□□ -1.94
Hmgb3O54879 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms