Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm24875-201ENSMUST00000158888 104 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm15974-201ENSMUST00000159103 531 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm18604-201ENSMUST00000172535 558 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm22177-201ENSMUST00000175002 158 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm22355-201ENSMUST00000175531 96 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm25120-201ENSMUST00000180148 79 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm27899-201ENSMUST00000184715 64 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm28503-201ENSMUST00000185966 147 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm28976-201ENSMUST00000188070 144 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm35702-201ENSMUST00000198653 511 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm42976-201ENSMUST00000200313 222 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm42474-201ENSMUST00000201073 505 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm9373-201ENSMUST00000208724 599 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm9375-201ENSMUST00000208899 903 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Snora31-201ENSMUST00000083213 130 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm25581-201ENSMUST00000083410 164 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm22829-201ENSMUST00000083771 106 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Tnfsf11O35235 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.13□□□□□ -1.91
Tnfsf11O35235 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm25097-201ENSMUST00000104042 145 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm23014-201ENSMUST00000104144 130 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm23608-201ENSMUST00000104545 128 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm15752-201ENSMUST00000117427 394 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm12520-201ENSMUST00000117493 316 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm12294-201ENSMUST00000119723 490 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm5379-201ENSMUST00000120973 826 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm13419-201ENSMUST00000121711 271 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm13745-201ENSMUST00000121994 527 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm25264-201ENSMUST00000158519 117 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm25944-201ENSMUST00000178758 94 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm27718-201ENSMUST00000183721 86 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm18800-202ENSMUST00000188688 1105 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm37708-201ENSMUST00000192337 895 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm7726-201ENSMUST00000206241 231 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm46998-201ENSMUST00000221444 330 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm23102-201ENSMUST00000083724 116 ntBASIC3.12□□□□□ -1.91
Tnfsf11O35235 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Tnfsf11O35235 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.11□□□□□ -1.91
Tnfsf11O35235 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Tnfsf11O35235 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.11□□□□□ -1.91
Tnfsf11O35235 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.11□□□□□ -1.91
Tnfsf11O35235 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.11□□□□□ -1.91
Tnfsf11O35235 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.11□□□□□ -1.91
Tnfsf11O35235 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms