Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.65□□□□□ -1.82
Scn1aA2APX8 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Scn1aA2APX8 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Scn1aA2APX8 Gm22590-201ENSMUST00000104247 128 ntBASIC3.65□□□□□ -1.82
Scn1aA2APX8 Gm23865-201ENSMUST00000157723 97 ntBASIC3.65□□□□□ -1.82
Scn1aA2APX8 Gm23082-201ENSMUST00000157852 133 ntBASIC3.65□□□□□ -1.82
Scn1aA2APX8 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.65□□□□□ -1.82
Scn1aA2APX8 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Scn1aA2APX8 Gm43892-201ENSMUST00000204373 265 ntBASIC3.65□□□□□ -1.82
Scn1aA2APX8 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Scn1aA2APX8 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.65□□□□□ -1.82
Scn1aA2APX8 Gm18899-201ENSMUST00000217663 546 ntBASIC3.65□□□□□ -1.82
Scn1aA2APX8 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Scn1aA2APX8 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.65□□□□□ -1.82
Scn1aA2APX8 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC3.65□□□□□ -1.82
Scn1aA2APX8 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.65□□□□□ -1.83
Scn1aA2APX8 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Scn1aA2APX8 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Scn1aA2APX8 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
Scn1aA2APX8 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm23530-201ENSMUST00000104564 137 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm14681-201ENSMUST00000118047 411 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm11877-201ENSMUST00000118921 852 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm12118-201ENSMUST00000119766 532 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm13788-201ENSMUST00000120767 601 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm24914-201ENSMUST00000157285 313 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm18604-201ENSMUST00000172535 558 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Mir3473a-201ENSMUST00000175011 78 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm5527-201ENSMUST00000179821 642 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Mir6418-201ENSMUST00000185075 115 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm28094-201ENSMUST00000185262 390 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm28314-201ENSMUST00000191276 345 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm18698-201ENSMUST00000192327 668 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.65□□□□□ -1.83
Scn1aA2APX8 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.65□□□□□ -1.83
Scn1aA2APX8 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Scn1aA2APX8 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Scn1aA2APX8 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Scn1aA2APX8 AC160931.3-201ENSMUST00000222111 2267 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Scn1aA2APX8 Mir673-201ENSMUST00000102361 91 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.64□□□□□ -1.83
Scn1aA2APX8 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.64□□□□□ -1.83
Scn1aA2APX8 Gm25835-201ENSMUST00000158917 144 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 Gm24465-201ENSMUST00000178398 107 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 Gm43655-201ENSMUST00000197367 222 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 Gm45735-201ENSMUST00000212779 319 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Scn1aA2APX8 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.64□□□□□ -1.83
Scn1aA2APX8 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Scn1aA2APX8 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm25843-201ENSMUST00000122582 314 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm23592-201ENSMUST00000157859 117 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm26993-201ENSMUST00000182766 789 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm44513-201ENSMUST00000206811 439 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm42539-201ENSMUST00000197009 308 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm2189-201ENSMUST00000201419 429 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm44003-201ENSMUST00000203024 490 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm44118-201ENSMUST00000204665 229 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 AC142113.2-201ENSMUST00000217425 748 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm25800-201ENSMUST00000082636 134 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm25099-201ENSMUST00000093716 116 ntBASIC3.63□□□□□ -1.83
Scn1aA2APX8 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.62□□□□□ -1.83
Scn1aA2APX8 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Scn1aA2APX8 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Scn1aA2APX8 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms