Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm11913-201ENSMUST00000119094 336 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm14739-201ENSMUST00000120424 802 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm26020-201ENSMUST00000122729 183 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm23671-201ENSMUST00000157472 103 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm22310-201ENSMUST00000157509 116 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm22116-201ENSMUST00000158791 141 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm21999-201ENSMUST00000165985 387 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm18953-201ENSMUST00000175694 300 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm26983-201ENSMUST00000182051 388 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm38166-201ENSMUST00000191660 471 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Mir101b-201ENSMUST00000083622 97 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm37124-201ENSMUST00000192140 1992 ntBASIC3.59□□□□□ -1.84
Scn8aQ9WTU3 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.59□□□□□ -1.84
Scn8aQ9WTU3 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.59□□□□□ -1.84
Scn8aQ9WTU3 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Scn8aQ9WTU3 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Scn8aQ9WTU3 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm24936-201ENSMUST00000122598 247 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm4207-201ENSMUST00000173144 960 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm8939-201ENSMUST00000192577 964 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm10161-201ENSMUST00000091506 204 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm12722-201ENSMUST00000118507 493 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm24534-201ENSMUST00000157949 291 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm25553-201ENSMUST00000158076 79 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm21960-201ENSMUST00000181924 452 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm28149-201ENSMUST00000187102 378 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm28768-201ENSMUST00000189034 378 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm32381-201ENSMUST00000203192 476 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 AC123064.2-201ENSMUST00000217758 193 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm8785-201ENSMUST00000220259 487 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Gm26063-201ENSMUST00000083378 107 ntBASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Scn8aQ9WTU3 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Gm12025-201ENSMUST00000117768 144 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Gm11704-201ENSMUST00000120031 214 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Gm16420-201ENSMUST00000120258 856 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Mir5127-201ENSMUST00000175295 71 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Snord92-201ENSMUST00000175548 85 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Gm38234-201ENSMUST00000195204 421 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Gm19104-201ENSMUST00000198392 679 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Gm44824-201ENSMUST00000207021 229 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Scn8aQ9WTU3 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm29452-201ENSMUST00000187996 313 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm28860-201ENSMUST00000188103 313 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.56□□□□□ -1.84
Scn8aQ9WTU3 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms