Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm26389-201ENSMUST00000179819 79 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm22130-201ENSMUST00000179979 79 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm22393-201ENSMUST00000180153 79 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm25085-201ENSMUST00000180298 79 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm19503-201ENSMUST00000187109 241 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm30280-201ENSMUST00000192214 262 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm7182-201ENSMUST00000193351 732 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm7093-201ENSMUST00000223004 581 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm5185-201ENSMUST00000080271 619 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trim3Q9R1R2 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trim3Q9R1R2 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Trim3Q9R1R2 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Trim3Q9R1R2 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Trim3Q9R1R2 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Trim3Q9R1R2 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trim3Q9R1R2 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
Trim3Q9R1R2 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm13359-201ENSMUST00000119000 695 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm9308-201ENSMUST00000119073 448 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm11890-201ENSMUST00000119585 417 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm5060-201ENSMUST00000120072 599 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm6373-201ENSMUST00000121026 360 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm12358-201ENSMUST00000121842 520 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Mir5106-201ENSMUST00000174936 73 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm11394-201ENSMUST00000181421 517 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Mir3620-201ENSMUST00000184710 61 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Mir6933-201ENSMUST00000184982 81 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm9722-201ENSMUST00000194568 802 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm19030-201ENSMUST00000194947 552 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm44137-201ENSMUST00000203670 367 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm17780-201ENSMUST00000207142 612 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm18039-201ENSMUST00000217816 728 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Platr25-208ENSMUST00000222602 939 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Trim3Q9R1R2 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Mup-ps15-201ENSMUST00000121741 539 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm12103-201ENSMUST00000121892 362 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm25598-201ENSMUST00000179031 107 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm27834-201ENSMUST00000183427 125 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm27718-201ENSMUST00000183721 86 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm28304-201ENSMUST00000185977 312 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm29256-201ENSMUST00000189094 312 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm28484-201ENSMUST00000190606 312 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm38332-201ENSMUST00000194189 147 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm29747-201ENSMUST00000194764 585 ntBASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.82□□□□□ -1.8
Trim3Q9R1R2 Gm42593-201ENSMUST00000198469 377 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms