Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm20526-201ENSMUST00000173416 158 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm7626-201ENSMUST00000195801 353 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm42580-201ENSMUST00000197223 753 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm46203-201ENSMUST00000218130 478 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm18409-202ENSMUST00000220105 529 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm24434-201ENSMUST00000104081 132 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Rnu11-201ENSMUST00000104135 134 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm14657-201ENSMUST00000117461 302 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm24719-201ENSMUST00000157520 110 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm26729-201ENSMUST00000180744 352 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm27608-201ENSMUST00000184822 162 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm34073-201ENSMUST00000195736 212 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm43284-201ENSMUST00000200103 253 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.84□□□□□ -1.47
Nubp1Q9R060 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Nubp1Q9R060 Gm44821-201ENSMUST00000208212 2002 ntBASIC5.84□□□□□ -1.48
Nubp1Q9R060 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.48
Nubp1Q9R060 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Nubp1Q9R060 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Nubp1Q9R060 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
Nubp1Q9R060 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Nubp1Q9R060 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
Nubp1Q9R060 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Nubp1Q9R060 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm12080-201ENSMUST00000119821 1883 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Nubp1Q9R060 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nubp1Q9R060 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nubp1Q9R060 BC051076-202ENSMUST00000199477 2868 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm23577-201ENSMUST00000103950 110 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm11633-201ENSMUST00000118176 444 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm5379-201ENSMUST00000120973 826 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm12630-201ENSMUST00000121575 784 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm22655-201ENSMUST00000174949 96 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm24520-201ENSMUST00000179510 110 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm26585-201ENSMUST00000180890 630 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.83□□□□□ -1.48
Nubp1Q9R060 Gm19243-201ENSMUST00000198592 269 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms