Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm9818-201ENSMUST00000050900 255 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm23447-201ENSMUST00000082798 163 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm23099-201ENSMUST00000083454 139 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm8074-201ENSMUST00000095071 252 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Olfr654-201ENSMUST00000098173 1155 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Mir804-201ENSMUST00000103251 95 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm11432-201ENSMUST00000117334 231 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm15161-201ENSMUST00000117340 387 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm16383-201ENSMUST00000118122 232 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm13213-201ENSMUST00000119668 474 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm13273-201ENSMUST00000119737 159 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm15194-201ENSMUST00000120453 434 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm15116-201ENSMUST00000122248 663 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm3053-201ENSMUST00000161709 616 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Mir3473c-201ENSMUST00000175262 81 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm21850-201ENSMUST00000179792 359 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm27233-201ENSMUST00000184030 307 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm27308-201ENSMUST00000184807 233 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm9541-201ENSMUST00000188409 502 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm29332-201ENSMUST00000190829 227 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm37961-201ENSMUST00000192729 299 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm19080-201ENSMUST00000196082 550 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm43018-201ENSMUST00000198075 1275 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm2314-201ENSMUST00000200391 586 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm43631-201ENSMUST00000202011 369 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm18007-201ENSMUST00000205019 844 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm45731-201ENSMUST00000211988 1203 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm45727-201ENSMUST00000212886 572 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm5176-202ENSMUST00000220267 583 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trem1Q9JKE2 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 BC051076-202ENSMUST00000199477 2868 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm26814-201ENSMUST00000181178 4149 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm15073-201ENSMUST00000117432 634 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm11896-201ENSMUST00000121105 820 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm25179-201ENSMUST00000122632 128 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm23753-201ENSMUST00000157575 149 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm26000-201ENSMUST00000157991 107 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm42814-201ENSMUST00000199370 460 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm17956-201ENSMUST00000199931 838 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm43894-201ENSMUST00000203274 688 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm44765-201ENSMUST00000206927 601 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm6112-201ENSMUST00000208037 629 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 AC112142.1-206ENSMUST00000228136 982 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Gm26121-201ENSMUST00000083364 162 ntBASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trem1Q9JKE2 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms