Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Mir7074-201ENSMUST00000183884 63 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm27427-201ENSMUST00000185134 193 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm28574-201ENSMUST00000185757 699 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm28781-201ENSMUST00000185760 696 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm28339-201ENSMUST00000185845 696 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm29062-201ENSMUST00000186032 694 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm29574-201ENSMUST00000186226 696 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm28828-201ENSMUST00000186601 696 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm28057-201ENSMUST00000186603 615 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm28255-201ENSMUST00000187101 694 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm29307-201ENSMUST00000187367 696 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm28397-201ENSMUST00000187970 699 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm28896-201ENSMUST00000188609 696 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm29545-201ENSMUST00000188878 694 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm29339-201ENSMUST00000189613 696 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm28159-201ENSMUST00000190296 696 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm29366-201ENSMUST00000190481 699 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm29407-201ENSMUST00000191468 696 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm37433-201ENSMUST00000192695 678 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm38356-201ENSMUST00000194313 408 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm37441-201ENSMUST00000194430 678 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm38107-201ENSMUST00000194873 696 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm42814-201ENSMUST00000199370 460 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm20177-201ENSMUST00000203705 334 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm17829-201ENSMUST00000219782 344 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm18441-201ENSMUST00000223539 617 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm25481-201ENSMUST00000083221 158 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Gm24319-201ENSMUST00000083389 107 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lima1Q9ERG0 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Lima1Q9ERG0 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.67□□□□□ -1.82
Lima1Q9ERG0 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Snord66-201ENSMUST00000104051 75 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm13567-201ENSMUST00000118026 247 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm12884-201ENSMUST00000120371 325 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm13366-201ENSMUST00000122198 970 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm20693-201ENSMUST00000177431 211 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm6625-201ENSMUST00000177870 272 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm15143-201ENSMUST00000178180 714 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm27718-201ENSMUST00000183721 86 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm27952-201ENSMUST00000184748 105 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm28975-201ENSMUST00000186412 686 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm28594-201ENSMUST00000187022 661 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm38283-201ENSMUST00000193041 695 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm36997-201ENSMUST00000195090 707 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm36985-201ENSMUST00000195595 379 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm20946-201ENSMUST00000212367 461 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm10794-201ENSMUST00000099624 207 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Lima1Q9ERG0 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.65□□□□□ -1.82
Lima1Q9ERG0 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Lima1Q9ERG0 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Lima1Q9ERG0 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm8475-201ENSMUST00000118211 526 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm13122-201ENSMUST00000118380 453 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm11403-201ENSMUST00000122195 369 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm23257-201ENSMUST00000158322 132 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Snord92-201ENSMUST00000175548 85 ntBASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Lima1Q9ERG0 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms