Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Gm23326-201ENSMUST00000157419 105 ntBASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Gm25519-201ENSMUST00000158392 127 ntBASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Gm4222-201ENSMUST00000165784 470 ntBASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Gm29064-201ENSMUST00000187014 813 ntBASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Gm2710-201ENSMUST00000073196 603 ntBASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cpsf1Q9EPU4 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Cpsf1Q9EPU4 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cpsf1Q9EPU4 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.9□□□□□ -1.63
Cpsf1Q9EPU4 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.9□□□□□ -1.63
Cpsf1Q9EPU4 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cpsf1Q9EPU4 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.9□□□□□ -1.63
Cpsf1Q9EPU4 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.9□□□□□ -1.63
Cpsf1Q9EPU4 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.9□□□□□ -1.63
Cpsf1Q9EPU4 Gm14385-201ENSMUST00000116315 876 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Gm28591-201ENSMUST00000185259 183 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Gm11325-201ENSMUST00000119967 469 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Gm11896-201ENSMUST00000121105 820 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Gm18597-201ENSMUST00000209519 694 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Gm4987-201ENSMUST00000078326 408 ntBASIC4.89□□□□□ -1.63
Cpsf1Q9EPU4 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm12025-201ENSMUST00000117768 144 ntBASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm12118-201ENSMUST00000119766 532 ntBASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm6947-201ENSMUST00000186254 78 ntBASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm45735-201ENSMUST00000212779 319 ntBASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cpsf1Q9EPU4 Gm38699-201ENSMUST00000221301 1740 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm24118-201ENSMUST00000103972 126 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm13873-201ENSMUST00000119208 427 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm13508-201ENSMUST00000121639 775 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm23755-201ENSMUST00000157578 343 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm15946-201ENSMUST00000160654 423 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm24819-201ENSMUST00000175094 166 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cpsf1Q9EPU4 Snord14e-201ENSMUST00000082857 90 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms