Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm23271-201ENSMUST00000104052 124 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm24318-201ENSMUST00000104490 131 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm12252-201ENSMUST00000119517 219 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm7618-201ENSMUST00000121643 171 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm24850-201ENSMUST00000158029 119 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm22501-201ENSMUST00000158981 127 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm16490-201ENSMUST00000165299 351 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Samd15-201ENSMUST00000169669 1194 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm5885-202ENSMUST00000203357 528 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm8774-201ENSMUST00000203621 692 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm44681-201ENSMUST00000208447 842 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 CT030194.1-201ENSMUST00000225507 532 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm7099-201ENSMUST00000080066 554 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdc40Q9DC48 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm26075-201ENSMUST00000104062 121 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm11719-201ENSMUST00000119399 351 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm12294-201ENSMUST00000119723 490 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm12885-201ENSMUST00000122246 328 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm14905-201ENSMUST00000122351 639 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm13868-201ENSMUST00000122411 294 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm21960-201ENSMUST00000181924 452 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm44371-201ENSMUST00000204148 467 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm45701-201ENSMUST00000212049 235 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdc40Q9DC48 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.66□□□□□ -1.82
Cdc40Q9DC48 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.65□□□□□ -1.82
Cdc40Q9DC48 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Cdc40Q9DC48 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.65□□□□□ -1.82
Cdc40Q9DC48 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Cdc40Q9DC48 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.65□□□□□ -1.82
Cdc40Q9DC48 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.65□□□□□ -1.82
Cdc40Q9DC48 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Cdc40Q9DC48 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.65□□□□□ -1.82
Cdc40Q9DC48 Gm14299-201ENSMUST00000117586 397 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm11625-201ENSMUST00000119535 296 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm13170-201ENSMUST00000119716 643 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm6373-201ENSMUST00000121026 360 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm26028-201ENSMUST00000158660 294 ntBASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Cdc40Q9DC48 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms