Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm7299-201ENSMUST00000194441 581 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm43039-201ENSMUST00000202883 963 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm23518-201ENSMUST00000082835 153 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Defa-ps18-201ENSMUST00000098889 371 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm14739-201ENSMUST00000120424 802 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm23168-201ENSMUST00000157156 143 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm23753-201ENSMUST00000157575 149 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm26746-201ENSMUST00000181722 487 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm29334-201ENSMUST00000190334 357 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm37104-201ENSMUST00000193278 196 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm37617-201ENSMUST00000194309 159 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm44681-201ENSMUST00000208447 842 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm45379-201ENSMUST00000211772 549 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc3Q9D6Y1 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm15933-201ENSMUST00000117215 616 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm13532-201ENSMUST00000120373 240 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm12226-201ENSMUST00000144172 876 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm7281-201ENSMUST00000160010 543 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm19637-201ENSMUST00000185933 579 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28975-201ENSMUST00000186412 686 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28598-201ENSMUST00000186490 615 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm29268-201ENSMUST00000188669 615 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm29218-205ENSMUST00000190846 615 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28978-201ENSMUST00000191120 615 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm37172-201ENSMUST00000191926 615 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm37111-201ENSMUST00000193250 634 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm45710-201ENSMUST00000212847 215 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr936-202ENSMUST00000216912 937 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.69□□□□□ -1.82
Ccdc3Q9D6Y1 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms