Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm25362-201ENSMUST00000158854 105 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm3531-201ENSMUST00000162698 489 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm22650-201ENSMUST00000175138 105 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm25194-201ENSMUST00000177987 79 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm38183-201ENSMUST00000193189 205 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm38040-201ENSMUST00000193505 225 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm18850-201ENSMUST00000211578 388 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm9292-201ENSMUST00000222008 710 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim42Q9D2H5 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm22267-201ENSMUST00000104008 131 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm23979-201ENSMUST00000104071 128 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm12939-201ENSMUST00000117303 165 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm11270-201ENSMUST00000117685 471 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm12396-201ENSMUST00000121600 306 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Mir5624-201ENSMUST00000176635 61 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm27004-201ENSMUST00000183300 727 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm28666-201ENSMUST00000186649 274 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm28506-201ENSMUST00000189937 150 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm42579-201ENSMUST00000200512 734 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm44083-201ENSMUST00000203114 337 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm8672-201ENSMUST00000221200 332 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm26442-201ENSMUST00000082588 153 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.7□□□□□ -1.5
Trim42Q9D2H5 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim42Q9D2H5 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.69□□□□□ -1.5
Trim42Q9D2H5 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim42Q9D2H5 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim42Q9D2H5 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.69□□□□□ -1.5
Trim42Q9D2H5 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim42Q9D2H5 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim42Q9D2H5 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms