Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm13386-201ENSMUST00000117677 124 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm13379-201ENSMUST00000118053 621 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm15387-201ENSMUST00000120421 648 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm26349-201ENSMUST00000157530 130 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm24664-201ENSMUST00000158939 100 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm25037-201ENSMUST00000175418 110 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm27457-201ENSMUST00000184771 156 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm29038-201ENSMUST00000191543 678 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm37164-201ENSMUST00000192809 637 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm8823-201ENSMUST00000193158 433 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm18327-201ENSMUST00000202426 830 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm45209-201ENSMUST00000207122 353 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm5518-201ENSMUST00000084171 648 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm12691-201ENSMUST00000120186 456 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm6062-201ENSMUST00000120462 631 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm13502-201ENSMUST00000121574 684 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm14713-201ENSMUST00000122362 686 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm15212-201ENSMUST00000122403 466 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm23789-201ENSMUST00000122536 301 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm25557-201ENSMUST00000158084 315 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Mir5098-201ENSMUST00000175320 82 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Mir6391-201ENSMUST00000184391 104 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm37601-201ENSMUST00000194922 394 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm43370-201ENSMUST00000196437 284 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm19418-201ENSMUST00000197436 580 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm42438-201ENSMUST00000197832 974 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm35570-201ENSMUST00000198730 681 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm44092-201ENSMUST00000204470 258 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm18462-201ENSMUST00000208112 417 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm18320-201ENSMUST00000211304 595 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm39197-201ENSMUST00000212069 457 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 AC121114.1-201ENSMUST00000228522 570 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Vps28Q9D1C8 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.46□□□□□ -1.69
Vps28Q9D1C8 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm26367-201ENSMUST00000104165 132 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm11406-201ENSMUST00000117418 484 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm14607-201ENSMUST00000119119 491 ntBASIC4.46□□□□□ -1.7
Vps28Q9D1C8 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms