Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm26176-201ENSMUST00000083795 105 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm24544-201ENSMUST00000103862 110 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm26075-201ENSMUST00000104062 121 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm12392-201ENSMUST00000118014 938 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm7855-201ENSMUST00000137737 687 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Trbv28-201ENSMUST00000192804 264 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm33973-201ENSMUST00000195148 534 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm37102-201ENSMUST00000195740 1105 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm42566-201ENSMUST00000197120 643 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm3010-201ENSMUST00000198805 448 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Smc1aQ9CU62 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm12294-201ENSMUST00000119723 490 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm5060-201ENSMUST00000120072 599 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm14905-201ENSMUST00000122351 639 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm25104-201ENSMUST00000122476 163 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm22764-201ENSMUST00000158370 92 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm27899-201ENSMUST00000184715 64 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm28920-201ENSMUST00000189957 699 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm4528-201ENSMUST00000207905 551 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm45247-201ENSMUST00000210757 309 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm18507-201ENSMUST00000218855 525 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.53□□□□□ -1.68
Smc1aQ9CU62 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.53□□□□□ -1.69
Smc1aQ9CU62 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm24788-201ENSMUST00000104283 156 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm12173-201ENSMUST00000117622 273 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm11843-201ENSMUST00000118984 425 ntBASIC4.52□□□□□ -1.69
Smc1aQ9CU62 Gm12252-201ENSMUST00000119517 219 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms