Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm37418-201ENSMUST00000195031 274 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm38088-201ENSMUST00000195829 241 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm7726-201ENSMUST00000206241 231 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm45189-201ENSMUST00000208567 363 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm4736-201ENSMUST00000100870 380 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm24715-201ENSMUST00000102377 95 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm11843-201ENSMUST00000118984 425 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm12885-201ENSMUST00000122246 328 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm3160-201ENSMUST00000128343 607 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm16331-201ENSMUST00000144274 498 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm23198-201ENSMUST00000158811 91 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm17075-201ENSMUST00000171924 670 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm24811-201ENSMUST00000175313 100 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm14527-201ENSMUST00000179300 639 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm29334-201ENSMUST00000190334 357 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm42451-201ENSMUST00000197410 244 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm43424-201ENSMUST00000200484 253 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm4045-201ENSMUST00000204076 310 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Use1Q9CQ56 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Use1Q9CQ56 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm26273-201ENSMUST00000104180 131 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm11874-201ENSMUST00000117437 130 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm12467-201ENSMUST00000117625 745 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm14623-201ENSMUST00000121398 603 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm22398-201ENSMUST00000174941 125 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm26460-201ENSMUST00000175061 126 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm25731-201ENSMUST00000175167 125 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm28594-201ENSMUST00000187022 661 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm18303-201ENSMUST00000190055 1176 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm37670-201ENSMUST00000193622 229 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm43814-201ENSMUST00000197851 413 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm43975-201ENSMUST00000203023 481 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm44092-201ENSMUST00000204470 258 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Gm22304-201ENSMUST00000082688 129 ntBASIC3.68□□□□□ -1.82
Use1Q9CQ56 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Use1Q9CQ56 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms