Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 AC124446.1-201ENSMUST00000221027 2644 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm25595-201ENSMUST00000102273 97 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm15531-201ENSMUST00000118062 252 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm13085-201ENSMUST00000118356 171 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm23214-201ENSMUST00000122716 157 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm22210-201ENSMUST00000158101 144 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm22420-201ENSMUST00000178795 126 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm8816-201ENSMUST00000182280 1163 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm27024-201ENSMUST00000182561 755 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm29229-201ENSMUST00000188874 323 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm7858-201ENSMUST00000190177 622 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm5731-201ENSMUST00000190969 481 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm5284-201ENSMUST00000199053 903 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm44074-201ENSMUST00000204562 337 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm44523-201ENSMUST00000205616 417 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 AC126690.1-201ENSMUST00000228898 397 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm37738-201ENSMUST00000192396 4716 ntBASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Trim11Q99PQ2 Gm40020-201ENSMUST00000215677 1635 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm8202-201ENSMUST00000117682 310 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm12230-201ENSMUST00000118301 454 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm13510-201ENSMUST00000118659 429 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Mup-ps18-201ENSMUST00000120145 531 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm14980-201ENSMUST00000121247 736 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm13214-201ENSMUST00000122137 408 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm23211-201ENSMUST00000122717 308 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm25430-201ENSMUST00000157614 289 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm24419-201ENSMUST00000157875 332 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm2147-201ENSMUST00000193588 639 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm43941-201ENSMUST00000203303 1073 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm8719-201ENSMUST00000203602 534 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm38574-201ENSMUST00000211855 640 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 AC162931.1-201ENSMUST00000214184 267 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm18120-201ENSMUST00000220079 511 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm4263-202ENSMUST00000221392 667 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Snora44-201ENSMUST00000082670 129 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Gm37789-201ENSMUST00000192862 2889 ntBASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim11Q99PQ2 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms